| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_4428 |
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| Symbol | trmE |
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| ID | 5163163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter uraniireducens Rf4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009483 |
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| Strand | - |
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| Start bp | 5132417 |
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| End bp | 5133784 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640551910 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_001233144 |
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| Protein GI | 148266438 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATGTTC AAGATACGAT TGCTGCCATA AGTACCCCCA CCGGTGAAGG TGGGGTCGGC
ATTATCAGGG TTAGCGGTAG GCATGTACTG TCTATAGCTG ATGCAATTTT CAAGAGGAAC
CGGGACGGTG GCTTACAAAG CCACCGTTTT TATTATGGTG CTATTATAGA TCCGGTCAGT
GCCGATTGTC TTGATGAAGT CATGGTCGTT TTCATGAAGG GACCACATTC CTATACCCGT
GAAGATGTCC TGGAAATACA ATGTCATGGT GGTTATCTGG TTGTGCAGCG GATTCTCGAC
CTTGTTTTGC AACAAGGGAC GCGTCTGGCT GGGCCGGGCG AGTTCACCAA GCGAGCTTTT
CTTAACGGCC GCATTGATCT TGTCCAGGCT GAGGCGATTA TTGATGTGAT ACGCAGCAAG
ACCGAAAAGT CACTTGCACT TGCCCAGCAT CAGCGAGAAG GATTGCTCTC TCAGCGTATT
GCCCGGGTTA AAGACGGGAT AGTTTCGTCA CTTGCTTTAA TCGAGGCTTT TATAGACTTT
CCCGAAGAAG ACATTGATGT ATTGGGCATT CAGCAGGTTG GGGCTCATGT GGATTGCTCT
TTGACTGAAT TGGAAACCTT GCTGGCCGGG TTTAACGAGG GCAAGGTGTT GCGTGACGGT
GTGTCTGTGG TTATTGCCGG TAAACCGAAT GTCGGTAAAT CGAGCCTGTT AAATACTCTT
TTACGGGAGA AACGGGCAAT TGTCACGTCG GTTCCCGGAA CGACCCGCGA TCTTATAGAA
GAAGTGGTGA CGATCAAAGG ACTGCCCGTT AAGCTACTCG ATACTGCCGG CATTCGTGAA
TCCGATGACC GGGTAGAGAG GGAGGGAATA AAGCTTTCCC TCGATAAGAT ACCTTCGGCC
GATCTGGTGC TCTTTATTAT TGATTCATCG CTACCGTTTT CCTCGGAAGA TCAGGCGATT
CTCGATGTTT TGGCACCCTG TAATTTCATC GTTGTGATGA ATAAATCGGA TATCTGCCGA
TCTTTTGATA TGCCACAGTT ACCCGATGTT CCGATCATTG CCGTTTCCAC TTTGACGGGT
GATGGTATCG ACGCTCTCCA GGATGCCATT TTTGAGGCGT TCATTCATAA TCATGCAGTT
GACAGCCGCG AATATGTTGC CGTTTCTCAA GCAAGACATC GCGACGCGCT CCAAAAGAGC
AGGGATGCTT TGCTTCGTTT TAGAGGCAAC TTGGTTGCCG GCATGGAACT GGATTTATTG
GCCATCGATC TTCGTGATGC ACTTTCCGCA ATCGGAGAAG TTACCGGTGA AACAACCGCG
GATGACGTGC TTGATCTTAT TTTCCAACGC TTTTGCATTG GTAAATAG
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| Protein sequence | MYVQDTIAAI STPTGEGGVG IIRVSGRHVL SIADAIFKRN RDGGLQSHRF YYGAIIDPVS
ADCLDEVMVV FMKGPHSYTR EDVLEIQCHG GYLVVQRILD LVLQQGTRLA GPGEFTKRAF
LNGRIDLVQA EAIIDVIRSK TEKSLALAQH QREGLLSQRI ARVKDGIVSS LALIEAFIDF
PEEDIDVLGI QQVGAHVDCS LTELETLLAG FNEGKVLRDG VSVVIAGKPN VGKSSLLNTL
LREKRAIVTS VPGTTRDLIE EVVTIKGLPV KLLDTAGIRE SDDRVEREGI KLSLDKIPSA
DLVLFIIDSS LPFSSEDQAI LDVLAPCNFI VVMNKSDICR SFDMPQLPDV PIIAVSTLTG
DGIDALQDAI FEAFIHNHAV DSREYVAVSQ ARHRDALQKS RDALLRFRGN LVAGMELDLL
AIDLRDALSA IGEVTGETTA DDVLDLIFQR FCIGK
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