| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_4417 |
|---|
| Symbol | |
|---|
| ID | 5165046 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | - |
|---|
| Start bp | 5120628 |
|---|
| End bp | 5121383 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640551899 |
|---|
| Product | lytic transglycosylase, catalytic |
|---|
| Protein accession | YP_001233133 |
|---|
| Protein GI | 148266427 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGATAA ACCAAGTAGA AACAAGGGTG CAGAATGATG TCAGCCGGCT GAAGGCTCAG
ATTGAAGCGG CTGGAAACAG CAGCGGGGCG CTGTTTGAAG AGGCCCTTTC AGCCGCAGGC
AATATGAAAA GCGGCAGCGG AAATCCACCG GTTACAGTGG CAACGGCGGC GGAAATTCTT
CATCTGCGGA TGTTAAGGAG TGCAGTTTCT CTGGGAGACG ACACCTCGAA TAACGATCCT
CCCCCCAGTA GCCAATCCAT AAATAAGGCG TTGTCGAGTT TTTTGGAACA GGAGCGGAAT
GGCGCCGCTG TCTCAGCTAC TTTGCCGGAG GATGACGGCA GCAAGTCCGA AAACAGGACG
CAAAACGCAG ACCGTGCCTC ACTGGATGCC ATCATCAGTA AAGCTTCTAA CCGCTATGGC
GTTGATGCGG GCCTTATCAA GGCCGTCATA AAAGCAGAAA GCAATTTTAA TTCCCATGCG
GTTTCACATG CAGGCGCGCA AGGGCTTATG CAGCTTATGC CGGCGACTGC CAAAGACTTG
GGTGTCAGCG ACTCTTTTGA TCCCGAACAG AATGTTATGG CAGGAACGCG GTTTTTAAAG
GATATGCTGA ACCGTTATGG CGGGAATGTG GAGTCTGCTC TGGCTGCCTA TAACTGGGGG
CCGGGCAATG TTGACAGAAA GGGGACATCG CTTCCCCGTG AAACCAGGGA TTACCTGGTC
AAGGTTAAAG GGTATTATAC CCAGTATGCC GGCTGA
|
|---|
| Protein sequence | MVINQVETRV QNDVSRLKAQ IEAAGNSSGA LFEEALSAAG NMKSGSGNPP VTVATAAEIL
HLRMLRSAVS LGDDTSNNDP PPSSQSINKA LSSFLEQERN GAAVSATLPE DDGSKSENRT
QNADRASLDA IISKASNRYG VDAGLIKAVI KAESNFNSHA VSHAGAQGLM QLMPATAKDL
GVSDSFDPEQ NVMAGTRFLK DMLNRYGGNV ESALAAYNWG PGNVDRKGTS LPRETRDYLV
KVKGYYTQYA G
|
|---|
| |