Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gura_4406 |
Symbol | |
ID | 5163265 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter uraniireducens Rf4 |
Kingdom | Bacteria |
Replicon accession | NC_009483 |
Strand | + |
Start bp | 5108690 |
End bp | 5111146 |
Gene Length | 2457 bp |
Protein Length | 818 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640551888 |
Product | 1A family penicillin-binding protein |
Protein accession | YP_001233122 |
Protein GI | 148266416 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000928316 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAATTT ACAAGGGGCG ATCAAACCCC GATCGCAGAA TTAAAAATAA TACCGGCAAT AAGCTAGGCA GGACCCTGCT TGTTGCGGGA GGAGTGACCG GAGTCCTCGC CCTCCTCGCC TTCATCGGCT ATTTTTTCTA TCTTCTCGGC ACCCTGCCGA AGGTGGACCG GCTGGCCGAT TACAGGCCGC CGATCGTTTC CCAGGTTTTC GGCGAAGACG GTAACCTGGT CGGCGAGTTT TATCTGGAGC GCCGCACCGT CGTCCCGGTG GACAAAGTGC CGAAGAAGCT GATCGAGGCC TTCGTTGCTG CCGAGGACTC GAACTTCTAC CAGCACAAGG GGATCGACTA TCTGGGAATC ATCAGGGCCG CGTTTAAAAA CCTCATCTCC ATGCGCAAGA AGGAAGGGGC CTCCACCATC ACCCAGCAGG TGGCAAAATC CATGCTCCTT ACCCCGGAAA AGAAATTTTC CCGCAAACTG AAGGAAGCCA TTCTCGCCAA ACGGATGGAG GAACGGCTGT CGAAGGATGA AATCCTCTAC ATCTACCTCA ACCAGATCTA TCTAGGCGCC GGGTCTTACG GCGTCCAGCT CGCTGCCGAG ACCTATTTCG CCAAGAATGT GGAAAGCCTG AATCTTGCGG AAATGGCCAT GCTTGCCGGG CTTCCCAAGG CGCCGAACAC CTATTCGCCG ATCAAGCACC TGGAAAAGGC CAAAGAACGG CAGAGTTACG TGTTGGAGAG GATGGTCAAG GAAGGGTATA TCACCCAGGC CGAGGCGGAC CACGCCAAAA ACACGCCGAT CGTCGTCCGT TCCCTGAAAA AGGTCAACAG CGAACAGTCT GCCTATTTCC TCGAACAGGT ACGCATCCAG CTGGAGGAAA AATACGGAGA GGACCGCCTC TACAAGGAAG GGCTGAGGAT CTACACCACC ATGAACGCCG AGATGCAGAA GGCTGCCTAT GAAGGGGTTG TCAACGGCCT CAAGGCCTTG GACAAGCGGC AGGGGTTCCG TGGCCCCGTC AAGTATCTGG CAGAGAGCGA GGTGGGTGAA TTCTGCAAAC ATGTTGAGGA CAGCATCGAT TCGGCGGCCC TGAAGCAGGG CGCAACGTTC CAGGGGGTGG TGACGGCGGT AAATTCTGCC AAAGGTGACG TGACGGTTAG AGTCGGCGAC AGAACCGGGA TTCTAAACCG GAAAAACATG GCCTGGGCGG GAAAAGTAAC CCTGCTGGAC ACATACGGAA AACCAGAGGG AGCCAAAGGT AAGGCCCTGC CGTTGGGAAG CGTGATCGAG GTTTCGGTGG TCACTCCTGA CGTGAACAAG TCCGGCGCGC TCTTTGCCCT TGACCAGGAA CCGGAAGCCC AGGCGGCCCT GTTTGCCATG GACCCTAAAA CCGGCGGAGT ACGCGCAATG GTAGGTGGTT ACGATTTCAA GAAAAGCCAG TTCAACCGTG CCATGCAGGC CAAGCGTAAC CCCGGTTCAG CGTTCAAACC GATTATTTAT GCGGCGGCCG TAGACAAAGG GATGACACCG GCTACCATAA TCGACGATGC GCCGGTGGAG TACGACAGCG GAAGGGAAAA GTCCTGGAAG CCGAAAAACT ACGACAACAT CTACCGCGGC GCAGTTACCA TGCGCGAAGC CCTGACCAAC TCCATAAACG TGGTCAGCAT CAAGATCCTT GAAAGCACCG GAGTGAACAC CGCCATTGAA TATGCCAAGA AACTTGGGAT AACCTCTCCC CTTGCCAACA ACCTGACCCT GGCCCTCGGC TCCTCCAGCC TCACCCCCAT GGAACTGACC AGCGCCTATG CGGTATTTGC CTCCGGCGGC TACAAGGTCA CGCCTTATTT CATAACCAAG GTGGTCGACA GTAAAGGAAA GGTTCTGGAA GAGATCGCTC CCCCCGCGCT GCCGGTCTTC TCTGCGGCGA CCTCGGCGGT GACATTGTCC ATGGACGAAG AAAGGAATGC TCCGGCTGCC GGCACCACTC TGACGGCTGT ACCGGCCATC TCGCCCGAGA CCTCCTATAT CATGACCAAC CTGATGGAAA GCGTCGTATC GAGCGGTACC GGGCAGCGGG CCAGGGCTTT GGGCCGTCCC GTGGCAGGAA AAACCGGCAC TACCAACGAT ATGAAGGACG CCTGGTTTAT CGGCTACGTG CCGCAACTGG TTGCGGGCGT ATGGGTCGGT TATGACCAGG AACGCTCGCT TGGAGCCGGC GGTTCGGGCG GGCAAGCCGC AGCCCCGATC TGGACCGAAT TCATGCAGCG CTCCCTGGGG GGCATGCCGG TTCAGAATTT CCCCGTGCCG GCCAACGTGA CCTTTGCCCT TATTAATCCG CGAACCGGCC GCTTGGCAAA GGAGGGGAGC GAAGGAAGCG TGACCGAATG TTTCATAACC GGTACTGAAC CGACGACCTA TGACGGAGAT GCCGTCAAAA CCGGCAGCGA CGAGTAA
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Protein sequence | MEIYKGRSNP DRRIKNNTGN KLGRTLLVAG GVTGVLALLA FIGYFFYLLG TLPKVDRLAD YRPPIVSQVF GEDGNLVGEF YLERRTVVPV DKVPKKLIEA FVAAEDSNFY QHKGIDYLGI IRAAFKNLIS MRKKEGASTI TQQVAKSMLL TPEKKFSRKL KEAILAKRME ERLSKDEILY IYLNQIYLGA GSYGVQLAAE TYFAKNVESL NLAEMAMLAG LPKAPNTYSP IKHLEKAKER QSYVLERMVK EGYITQAEAD HAKNTPIVVR SLKKVNSEQS AYFLEQVRIQ LEEKYGEDRL YKEGLRIYTT MNAEMQKAAY EGVVNGLKAL DKRQGFRGPV KYLAESEVGE FCKHVEDSID SAALKQGATF QGVVTAVNSA KGDVTVRVGD RTGILNRKNM AWAGKVTLLD TYGKPEGAKG KALPLGSVIE VSVVTPDVNK SGALFALDQE PEAQAALFAM DPKTGGVRAM VGGYDFKKSQ FNRAMQAKRN PGSAFKPIIY AAAVDKGMTP ATIIDDAPVE YDSGREKSWK PKNYDNIYRG AVTMREALTN SINVVSIKIL ESTGVNTAIE YAKKLGITSP LANNLTLALG SSSLTPMELT SAYAVFASGG YKVTPYFITK VVDSKGKVLE EIAPPALPVF SAATSAVTLS MDEERNAPAA GTTLTAVPAI SPETSYIMTN LMESVVSSGT GQRARALGRP VAGKTGTTND MKDAWFIGYV PQLVAGVWVG YDQERSLGAG GSGGQAAAPI WTEFMQRSLG GMPVQNFPVP ANVTFALINP RTGRLAKEGS EGSVTECFIT GTEPTTYDGD AVKTGSDE
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