Gene Gura_4406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGura_4406 
Symbol 
ID5163265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter uraniireducens Rf4 
KingdomBacteria 
Replicon accessionNC_009483 
Strand
Start bp5108690 
End bp5111146 
Gene Length2457 bp 
Protein Length818 aa 
Translation table11 
GC content57% 
IMG OID640551888 
Product1A family penicillin-binding protein 
Protein accessionYP_001233122 
Protein GI148266416 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG5009] Membrane carboxypeptidase/penicillin-binding protein 
TIGRFAM ID[TIGR02074] penicillin-binding protein, 1A family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000928316 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAATTT ACAAGGGGCG ATCAAACCCC GATCGCAGAA TTAAAAATAA TACCGGCAAT 
AAGCTAGGCA GGACCCTGCT TGTTGCGGGA GGAGTGACCG GAGTCCTCGC CCTCCTCGCC
TTCATCGGCT ATTTTTTCTA TCTTCTCGGC ACCCTGCCGA AGGTGGACCG GCTGGCCGAT
TACAGGCCGC CGATCGTTTC CCAGGTTTTC GGCGAAGACG GTAACCTGGT CGGCGAGTTT
TATCTGGAGC GCCGCACCGT CGTCCCGGTG GACAAAGTGC CGAAGAAGCT GATCGAGGCC
TTCGTTGCTG CCGAGGACTC GAACTTCTAC CAGCACAAGG GGATCGACTA TCTGGGAATC
ATCAGGGCCG CGTTTAAAAA CCTCATCTCC ATGCGCAAGA AGGAAGGGGC CTCCACCATC
ACCCAGCAGG TGGCAAAATC CATGCTCCTT ACCCCGGAAA AGAAATTTTC CCGCAAACTG
AAGGAAGCCA TTCTCGCCAA ACGGATGGAG GAACGGCTGT CGAAGGATGA AATCCTCTAC
ATCTACCTCA ACCAGATCTA TCTAGGCGCC GGGTCTTACG GCGTCCAGCT CGCTGCCGAG
ACCTATTTCG CCAAGAATGT GGAAAGCCTG AATCTTGCGG AAATGGCCAT GCTTGCCGGG
CTTCCCAAGG CGCCGAACAC CTATTCGCCG ATCAAGCACC TGGAAAAGGC CAAAGAACGG
CAGAGTTACG TGTTGGAGAG GATGGTCAAG GAAGGGTATA TCACCCAGGC CGAGGCGGAC
CACGCCAAAA ACACGCCGAT CGTCGTCCGT TCCCTGAAAA AGGTCAACAG CGAACAGTCT
GCCTATTTCC TCGAACAGGT ACGCATCCAG CTGGAGGAAA AATACGGAGA GGACCGCCTC
TACAAGGAAG GGCTGAGGAT CTACACCACC ATGAACGCCG AGATGCAGAA GGCTGCCTAT
GAAGGGGTTG TCAACGGCCT CAAGGCCTTG GACAAGCGGC AGGGGTTCCG TGGCCCCGTC
AAGTATCTGG CAGAGAGCGA GGTGGGTGAA TTCTGCAAAC ATGTTGAGGA CAGCATCGAT
TCGGCGGCCC TGAAGCAGGG CGCAACGTTC CAGGGGGTGG TGACGGCGGT AAATTCTGCC
AAAGGTGACG TGACGGTTAG AGTCGGCGAC AGAACCGGGA TTCTAAACCG GAAAAACATG
GCCTGGGCGG GAAAAGTAAC CCTGCTGGAC ACATACGGAA AACCAGAGGG AGCCAAAGGT
AAGGCCCTGC CGTTGGGAAG CGTGATCGAG GTTTCGGTGG TCACTCCTGA CGTGAACAAG
TCCGGCGCGC TCTTTGCCCT TGACCAGGAA CCGGAAGCCC AGGCGGCCCT GTTTGCCATG
GACCCTAAAA CCGGCGGAGT ACGCGCAATG GTAGGTGGTT ACGATTTCAA GAAAAGCCAG
TTCAACCGTG CCATGCAGGC CAAGCGTAAC CCCGGTTCAG CGTTCAAACC GATTATTTAT
GCGGCGGCCG TAGACAAAGG GATGACACCG GCTACCATAA TCGACGATGC GCCGGTGGAG
TACGACAGCG GAAGGGAAAA GTCCTGGAAG CCGAAAAACT ACGACAACAT CTACCGCGGC
GCAGTTACCA TGCGCGAAGC CCTGACCAAC TCCATAAACG TGGTCAGCAT CAAGATCCTT
GAAAGCACCG GAGTGAACAC CGCCATTGAA TATGCCAAGA AACTTGGGAT AACCTCTCCC
CTTGCCAACA ACCTGACCCT GGCCCTCGGC TCCTCCAGCC TCACCCCCAT GGAACTGACC
AGCGCCTATG CGGTATTTGC CTCCGGCGGC TACAAGGTCA CGCCTTATTT CATAACCAAG
GTGGTCGACA GTAAAGGAAA GGTTCTGGAA GAGATCGCTC CCCCCGCGCT GCCGGTCTTC
TCTGCGGCGA CCTCGGCGGT GACATTGTCC ATGGACGAAG AAAGGAATGC TCCGGCTGCC
GGCACCACTC TGACGGCTGT ACCGGCCATC TCGCCCGAGA CCTCCTATAT CATGACCAAC
CTGATGGAAA GCGTCGTATC GAGCGGTACC GGGCAGCGGG CCAGGGCTTT GGGCCGTCCC
GTGGCAGGAA AAACCGGCAC TACCAACGAT ATGAAGGACG CCTGGTTTAT CGGCTACGTG
CCGCAACTGG TTGCGGGCGT ATGGGTCGGT TATGACCAGG AACGCTCGCT TGGAGCCGGC
GGTTCGGGCG GGCAAGCCGC AGCCCCGATC TGGACCGAAT TCATGCAGCG CTCCCTGGGG
GGCATGCCGG TTCAGAATTT CCCCGTGCCG GCCAACGTGA CCTTTGCCCT TATTAATCCG
CGAACCGGCC GCTTGGCAAA GGAGGGGAGC GAAGGAAGCG TGACCGAATG TTTCATAACC
GGTACTGAAC CGACGACCTA TGACGGAGAT GCCGTCAAAA CCGGCAGCGA CGAGTAA
 
Protein sequence
MEIYKGRSNP DRRIKNNTGN KLGRTLLVAG GVTGVLALLA FIGYFFYLLG TLPKVDRLAD 
YRPPIVSQVF GEDGNLVGEF YLERRTVVPV DKVPKKLIEA FVAAEDSNFY QHKGIDYLGI
IRAAFKNLIS MRKKEGASTI TQQVAKSMLL TPEKKFSRKL KEAILAKRME ERLSKDEILY
IYLNQIYLGA GSYGVQLAAE TYFAKNVESL NLAEMAMLAG LPKAPNTYSP IKHLEKAKER
QSYVLERMVK EGYITQAEAD HAKNTPIVVR SLKKVNSEQS AYFLEQVRIQ LEEKYGEDRL
YKEGLRIYTT MNAEMQKAAY EGVVNGLKAL DKRQGFRGPV KYLAESEVGE FCKHVEDSID
SAALKQGATF QGVVTAVNSA KGDVTVRVGD RTGILNRKNM AWAGKVTLLD TYGKPEGAKG
KALPLGSVIE VSVVTPDVNK SGALFALDQE PEAQAALFAM DPKTGGVRAM VGGYDFKKSQ
FNRAMQAKRN PGSAFKPIIY AAAVDKGMTP ATIIDDAPVE YDSGREKSWK PKNYDNIYRG
AVTMREALTN SINVVSIKIL ESTGVNTAIE YAKKLGITSP LANNLTLALG SSSLTPMELT
SAYAVFASGG YKVTPYFITK VVDSKGKVLE EIAPPALPVF SAATSAVTLS MDEERNAPAA
GTTLTAVPAI SPETSYIMTN LMESVVSSGT GQRARALGRP VAGKTGTTND MKDAWFIGYV
PQLVAGVWVG YDQERSLGAG GSGGQAAAPI WTEFMQRSLG GMPVQNFPVP ANVTFALINP
RTGRLAKEGS EGSVTECFIT GTEPTTYDGD AVKTGSDE