Gene Gura_4295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGura_4295 
Symbol 
ID5166075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter uraniireducens Rf4 
KingdomBacteria 
Replicon accessionNC_009483 
Strand
Start bp4958325 
End bp4959725 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content54% 
IMG OID640551774 
Productprotease Do 
Protein accessionYP_001233011 
Protein GI148266305 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID[TIGR02037] periplasmic serine protease, Do/DeqQ family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000836052 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTAAAC AATCTACAAA GATTTTGGCA CTCGTCATCT GTTGCGTAAC GTTGTCAGGC 
CTTTTTAGCG AAAGCGCTCC GGCGAAGGCC GTCACCCCGG ATTTCGTCGA ACTGGCAAAG
AAACTTAAAC CGACCGTAGT GAATATCAGC ACGGCTAAGA CCATAAAGCC GCAACGACGT
TTTCAGCGCC CCTTCGGCAC CCCTTTCGGT AACGACCCAT TCCAGGATTT TTTTGATCGG
TTTTTCGATG AATCTCAGCA ACACCCCTAT AAGCAGAAGA GCCTCGGCTC GGGTTTCATA
ATAAGCGACG AGGGGTACAT CATTACCAAC AACCACGTTG TGTCCGGTGC TGATGAAATC
AAGGTGAAGC TTTCCGACGG TCGCGAATTT AAAGGTGAGA TCAAGGGCTC CGATGAAAAG
CTCGATCTCG CCCTGGTCAA GATTTCCGCC AAAGACCATC TGCCGGTCGC AACCCTGGGG
GACAGCGACA CCATTGAAGT GGGCGAATGG GTAATGGCGA TCGGTAATCC GTTCGGTTTG
GCACAGACGG TAACTGCCGG GATCGTCAGC GCCCAGGGAA GGGTAATCGG CAGCGGCCCC
TATGACGACT TTATCCAGAC CGACGCATCC ATCAACCCCG GCAACTCGGG CGGCCCCCTT
TTCAATGCTC ACGGAGAAGT AATCGGCATC AATACCGCCA TCATCGCCGG CGGACAGGGA
ATCGGTTTCG CCATTCCGGT CAACATGGCA AAGAACATCA TTACCCAGTT GAAGGAAACA
GGAAAAGTAA CGAGGGGATG GATCGGGGTT TCCATACAGC CGATAACCCC TGAACTTGCC
CAGTCATTCG ACTTGGAGGG GGAAAAAGGC GCGCTGGTTG CCGAGATTGT CAAGGATAGC
CCGGCCGAAA AAGCCGGCAT AAAGACCGGC GACATCATCC TGGAGTTCAA TGGCAAGATG
ATCCATGAGA TGAACGAACT GCCTCGGCTG GTAGCGGCAA CACCGGTCGG GAAAAAGGTT
ACGGTCAAAA TATTGCGTGA AGGAAAATCC GAAGATGTTC CCGTGACCGT TGAACGACTC
AAGGATGGAG AAGCGGGCGG GCAGCCGGGA ATAGGACAGG ACAGACTGGG AATGACCGTC
AGGGCGCTGA ACAAGGATCT GGCTGCCAGG ATGGGGATCA AAGAGCAAAG CGGTGTTGTC
GTGACGGAGA TCAAGGCCGG CGGCAGTGCT GAACAGGCCG GGATCTCCAT TGGGGACATC
ATCAGGGAAA TCAACGGCGC CAGGATCGAC AGTATCGGCG ATTATGAAAA GGCAGTTACC
GCACACAAGA AGGGCGGGGT AATACGTCTC TTGTTGCGCA GGGGAGAAAG TTCCCTCTTC
GTGGCCTTCA AGGTCGAGTA G
 
Protein sequence
MRKQSTKILA LVICCVTLSG LFSESAPAKA VTPDFVELAK KLKPTVVNIS TAKTIKPQRR 
FQRPFGTPFG NDPFQDFFDR FFDESQQHPY KQKSLGSGFI ISDEGYIITN NHVVSGADEI
KVKLSDGREF KGEIKGSDEK LDLALVKISA KDHLPVATLG DSDTIEVGEW VMAIGNPFGL
AQTVTAGIVS AQGRVIGSGP YDDFIQTDAS INPGNSGGPL FNAHGEVIGI NTAIIAGGQG
IGFAIPVNMA KNIITQLKET GKVTRGWIGV SIQPITPELA QSFDLEGEKG ALVAEIVKDS
PAEKAGIKTG DIILEFNGKM IHEMNELPRL VAATPVGKKV TVKILREGKS EDVPVTVERL
KDGEAGGQPG IGQDRLGMTV RALNKDLAAR MGIKEQSGVV VTEIKAGGSA EQAGISIGDI
IREINGARID SIGDYEKAVT AHKKGGVIRL LLRRGESSLF VAFKVE