| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_4282 |
|---|
| Symbol | ubiA |
|---|
| ID | 5166621 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | + |
|---|
| Start bp | 4945230 |
|---|
| End bp | 4946102 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640551761 |
|---|
| Product | prenyltransferase |
|---|
| Protein accession | YP_001232998 |
|---|
| Protein GI | 148266292 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
|---|
| TIGRFAM ID | [TIGR01475] putative 4-hydroxybenzoate polyprenyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCTGT TCGACAAAAT CAAGGTATTC CTGGAGATGA TCAAGTTCTC CCATACCATC
TTCGCTCTCC CCTTTGCTTT TACCGGCGCA TTGCTGGCCG CGCGCGGCCT GCCGACTGCC
TACCAGACGC TCTGGATACT TATGGCCATG GTCGGTGCCC GCACCGCAGC CATGAGTCTG
AACCGAATGA TAGACGCGGA GATCGACGGG CAGAATCCGC GAACCAGCGG GCGTGCCCTG
CCGGCCGGCT TGCTCAGCAA GGGGATGGTG GCCGTTTTCA TTGCCCTATC CCTCACTCTC
ATGCTCTTTG CCGCCCGGAT GCTCAACCCT TTGTGCCTCT ATCTTTCGCC GGTGGCGCTC
TTTTTTCTCG TGCTCTATTC CTATTGCAAG CGCTTTACCG CTCTGGCCCA TGTGGTGCTC
GGGCTTTGCC TGGCTGCCGC GCCGCTCGGC GCCTGGATCG CCATTACCGG TACGATTGAA
CTCCCTGCCG TGCTCCTGGC GTTGGCGGTT CTTCTCTGGG TGGCCGGATT CGACATCCTT
TACGCACTAC AGGATCTGGA ATTCGACCGG ACCAGCGGAC TCCACTCCAT CCCGGTACGG
CTCGGCATCT CCGGCTCACT CTGGACCGCG CGCATCTTCC ACCTGCTGAT GATCGCTCTT
TTGACCGGCC TCTTCTTTCT ACTGCACCTC GGTCCGTACT TCTTTGTCGG CCTGACCATT
ACCGTCATCT TGACTGCCTA CGAACACTGG CTGCTCCGTG ACGGCGACCT GACCAGGCTC
GACGCCGCGT TCTTCAACAT GAACGGCTAT ATCAGCGTCA CCGTTCTGGT CTTTACCCTG
CTCGACATCC TGTTTTACCG GGGGGGGGCA TGA
|
|---|
| Protein sequence | MNLFDKIKVF LEMIKFSHTI FALPFAFTGA LLAARGLPTA YQTLWILMAM VGARTAAMSL
NRMIDAEIDG QNPRTSGRAL PAGLLSKGMV AVFIALSLTL MLFAARMLNP LCLYLSPVAL
FFLVLYSYCK RFTALAHVVL GLCLAAAPLG AWIAITGTIE LPAVLLALAV LLWVAGFDIL
YALQDLEFDR TSGLHSIPVR LGISGSLWTA RIFHLLMIAL LTGLFFLLHL GPYFFVGLTI
TVILTAYEHW LLRDGDLTRL DAAFFNMNGY ISVTVLVFTL LDILFYRGGA
|
|---|
| |