Gene Gura_4171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGura_4171 
Symbol 
ID5164376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter uraniireducens Rf4 
KingdomBacteria 
Replicon accessionNC_009483 
Strand
Start bp4830956 
End bp4833016 
Gene Length2061 bp 
Protein Length686 aa 
Translation table11 
GC content56% 
IMG OID640551649 
ProductCheA signal transduction histidine kinase 
Protein accessionYP_001232887 
Protein GI148266181 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0643] Chemotaxis protein histidine kinase and related kinases
[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGAACC TGAACAAATA CCTCAAGATA TTCTTCAAGG AAGCGCAGGA GCACCTGGAA 
GCTCTCCAGA AGGGGCTTCT CACCCTGGAA AAGGAGCCGG CCGACCGGGT GCTCCTTCGC
GACCTCATGC GCAATGCCCA CACCCTGAAA GGATCGGCGA AACTGGTGGG GCTGGAGGAG
ATAGGCGCCA TCGCCCACCG AATGGAAGAC CTGTTCGAGG AGATCGAAAG GGGGGGCAGG
GAGGTGAACA GCCAGGTCAT CGACCTCTTG CTTAAGGGAT CTGACGCCAT TTCCCGGCTG
GTCACCGCCC GGATCAACAA CGATGAGCCG CCGTTCGACG TGGAGAAATT CATCATCGCC
TTTACACAAG GTGATATCAC CCCCGAAGTG CTGGAAAGGA AAGTACTGCC CCAGGCTAAC
GAAGGAGAGG AAACGGTCCG GACCAATGTT AAAACCCTCG ACAACCTCAT CAACCGCCTC
GGCGAGCTGA TCATAAACAA AAAGCGCTTC GAAGATAAAA TTGTCCGGCT GAAGGGTCTG
TGCGGCAAAA CCGTCGACCA GGAATTCGCT CCTGCGCTCC AGGGATTTCA ACGGGAGCTG
GAGGAAGATG TCCTGTACCT CGATTACCTG GTTCAGGAGC TGCATGGCGA GGCAATGGCT
CTTCGCATGC TTCCGTTGCG TACCATTACC GACGGGTTTG AGCGCATGGT ACGCGATCTG
TCGCATGAAC AGGGAAAGAT AATCGAATTT AAGGTCACCG GTGCGCAGAT CGAGATGGAT
CGGGTGCTCC TTGATGCTGT CAAGCCCATG ATCCTGCACA TTCTCAGGAA CTCCGTGGAT
CATGGCATTG AATCCCTCGA AGAGCGCCTT GTGGAGGGAA AACCGCCAAA GGGCACCATA
GAAATATCTG CCAGGCTTGA TGGAGGCGGG GTACGTCTGG ATATTCGCGA TGACGGTCGG
GGGATCGACC CGCAGCTGGT CAGAGAGGCA GCACTGCGCA AAAGGCTAAT CAGCCGGGAA
GACGCCGTTT CAATGGATGA CAATGCCGCG CGCTACCTGA TCCTCGAAGA GGGCTTCTCT
ACCAGGGATT TTATCACCGA CACATCCGGC CGCGGCATCG GCATGGGTGT GGTGAAAAAA
AACATGGAAC GGATGAAAGG GCATCTTTCC ATCGTCAGCG AAGTCGGCCG CTTTACCGAG
TTCACGCTGC AACTGCCGCT GACCCTCTCG ATCATGGAAA CCCTGCTGAT CCTCTGCGCT
GGAGAATGTT ACGCCGTTCC CCTCTCTTAC GTTCAGGAAA CGATTAAAAT CCGCAGTGAA
GACATAACCA CCGTCGGCGG CAAAGAGGTG ATATCCCTGC GCGGCGCCAC CATACCGCTG
GTGTCGTTGC CGGCCCTCCT TGGACTCACA GAAAACAAGA CCCTGCTGAA ATCGGAGAGA
ATCACGGCGA TTATCGTATC CTTACGCGGA CAATGCCTTG CCTGCACCAT CGATGCAAGC
CTGGAAAGTT CGGAGGTAGT GGTAAAAAGC CTCGGTAACC AGCTGAAAAA TGTCACCTTC
GTCTTCGGCG CCACCATTCT CGGCAACGGC GATCCTGCCC TTATTCTCAA CGTGCCGGAC
ATCTTCGCCA GGGCCGAAGG GGGCGCTTCG ACCGGTTTCC GCGCGATGAT CGAGGAGCGC
CGGGCAACCA GGGCAAAGGG ACACATCCTG GTGGTGGACG ATTCCATCAC CACCCGTACC
ATGGAACGGA GCATTCTGGT CACCCACGGC TACGAGGTGG AAATCGCCAT TTCCGGCGAG
GACGCACTGG AAAAGGTGGC CGGCACAAGG TTCGACCTGG TAATTTCCGA TGTGATGATG
CCCGGCATCA GCGGTTTCGA ATTGACCAGG AGACTGCGGA CAATGGAAGA TTATCGGGAT
GTGCCGGTCA TCATCGTTTC ATCCCTGGCC CGCGACGAAG ACAAGCGCCA GGCTATGGAG
TCCGGCGCCC AGGCTTACAT TGTGAAGGGA ACCTTTGACC AGGGAACCCT GCTTGAAACG
GTAAAAGCCT TCCTCAGCTG A
 
Protein sequence
MPNLNKYLKI FFKEAQEHLE ALQKGLLTLE KEPADRVLLR DLMRNAHTLK GSAKLVGLEE 
IGAIAHRMED LFEEIERGGR EVNSQVIDLL LKGSDAISRL VTARINNDEP PFDVEKFIIA
FTQGDITPEV LERKVLPQAN EGEETVRTNV KTLDNLINRL GELIINKKRF EDKIVRLKGL
CGKTVDQEFA PALQGFQREL EEDVLYLDYL VQELHGEAMA LRMLPLRTIT DGFERMVRDL
SHEQGKIIEF KVTGAQIEMD RVLLDAVKPM ILHILRNSVD HGIESLEERL VEGKPPKGTI
EISARLDGGG VRLDIRDDGR GIDPQLVREA ALRKRLISRE DAVSMDDNAA RYLILEEGFS
TRDFITDTSG RGIGMGVVKK NMERMKGHLS IVSEVGRFTE FTLQLPLTLS IMETLLILCA
GECYAVPLSY VQETIKIRSE DITTVGGKEV ISLRGATIPL VSLPALLGLT ENKTLLKSER
ITAIIVSLRG QCLACTIDAS LESSEVVVKS LGNQLKNVTF VFGATILGNG DPALILNVPD
IFARAEGGAS TGFRAMIEER RATRAKGHIL VVDDSITTRT MERSILVTHG YEVEIAISGE
DALEKVAGTR FDLVISDVMM PGISGFELTR RLRTMEDYRD VPVIIVSSLA RDEDKRQAME
SGAQAYIVKG TFDQGTLLET VKAFLS