| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_4012 |
|---|
| Symbol | |
|---|
| ID | 5164411 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | + |
|---|
| Start bp | 4667330 |
|---|
| End bp | 4668214 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640551491 |
|---|
| Product | tyrosine recombinase XerC |
|---|
| Protein accession | YP_001232729 |
|---|
| Protein GI | 148266023 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00152232 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAGG CAATAGAGCA ATTCTGCCGC TACCTTTCCA CTGAGCGGAA TGTTTCACCA
CACACCCTGG GTGCCTATCG GAGCGACCTG GAGCAGTTCC TGGCGTTCAT CGACCGGGAG
CAGCGTCCCG GAGCCGACGT CAACAGCGTA ACCCATTTGC TCATCAGACG GTACATGGCC
CAGCTCCACA AAGACCACCA GAAGAGCTCC ATCGGCAGGA AACTTGCGGC GATCCGCGCC
TTTTTCCGAT ACCTGCTGCG CGAGGGACTG GCGGCAAAAA ATCCGGCCGA GCTTGTCAGC
ACACCAAAAA TGGAGAAAAA GGTTCCCTTC CACCTCAACA TCGACGAGGT TACCGCTCTG
GTGGAAGCGC CGCAAAGCGC CGACAGCTTG AGCCTGCGCA ACCGTGCCAT ACTGGAGACC
CTTTATTCGT GCGGCATCAG GGTCTCTGAG CTGACCGGAC TCAATGTGGG AGACGTGGAC
ATGGACGAGC GGCTCGCGCG GGTGCTGGGC AAGGGAAACA AGGAACGGAT CGTGCCGGTG
GGCACTTATG CCCGCAACGC ATTGGCCGCC TACCTGGCCT CACGGAACAA TCCCTCCATG
GACGCCCCGC TGATCCTCAA CGCCAGGGGG GGGCGGCTGA CCAGTCGTAG CGTGGCCCGC
ATCATCGACA AGTACATCAT AAAAATCGCC GCCATGAAGA AGGTCTCACC CCATACCCTG
CGCCATACAT TCGCCACCCA TATGCTGGAA GGGGGAGCAG ACCTGCGCGC CATCCAGGAA
CTCCTCGGCC ACTCATCGCT CTCCACTACC CAGAAATACA CCCATGTGAG CATCGATCGG
CTTATGGAGG TCTACGACAA AGCCCACCCC AAAGCGCGGA GCTGA
|
|---|
| Protein sequence | MKQAIEQFCR YLSTERNVSP HTLGAYRSDL EQFLAFIDRE QRPGADVNSV THLLIRRYMA
QLHKDHQKSS IGRKLAAIRA FFRYLLREGL AAKNPAELVS TPKMEKKVPF HLNIDEVTAL
VEAPQSADSL SLRNRAILET LYSCGIRVSE LTGLNVGDVD MDERLARVLG KGNKERIVPV
GTYARNALAA YLASRNNPSM DAPLILNARG GRLTSRSVAR IIDKYIIKIA AMKKVSPHTL
RHTFATHMLE GGADLRAIQE LLGHSSLSTT QKYTHVSIDR LMEVYDKAHP KARS
|
|---|
| |