| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_4005 |
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| Symbol | |
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| ID | 5164051 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter uraniireducens Rf4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009483 |
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| Strand | + |
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| Start bp | 4658396 |
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| End bp | 4659712 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640551484 |
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| Product | response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_001232722 |
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| Protein GI | 148266016 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000169909 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCCTCG GAATAAACGG AAAGTGTATG AGTATACCAC TAAGGGTGTT AATTGTTGAA
GACTCTCCTG ATGATGCTGA ACTCCTCTTG CGGGAATTGC GGCACGGTGG ATTCGATCCG
TCTTTCCAGC GGGTCGATAC TGCGGAGGGC ATGATGTCAG CCCTTGAAGA TCAGACGTGG
GACATTGTCA TTACAGACTA CGTCATGCCG CACTTCAACG GCATGGCCGC CTTGAACTTG
CTTCAGGAGA AGGGGCTCGA CCTGCCGTGC ATAATCGTCT CCGGTAAAAT CGGCGAGGAT
GCAGCGGTGG AAGCCATGCG CGGCGGCGCC CACGATTATT TTGTCAAGGG GCAGCTGGCG
CGCCTTATAC CCGCCATCAA ACGAGAGCTG GTCGAAGCAA GGATACGACA GGAGAGGAAG
CGGGACGAAG AAATTCTGCG GCAGCAACTG GCAGCCATGG AAAGTTCACT GGACGGCATG
GCGACCATCA ACCGTAGCGG CGAATTCATC TATCTTAATC ACGCCCATGC CGAAATCCAT
GGATACGACA CCCCGGAGGA ACTCATCGGC AAAACATGGA AGGGCCTCTA TGAGGAAAGA
GAGGTCAGGA GGTTTGAAAA CGAGATATTG CCGATCCTAT GCCTGAACGG CAAATGGCGG
GGAGAGGCAA CGGGAAAGAA GAGGAACGGG ACTCCTTTCC CCGAGGAGAT ATCCCTTGCC
CTCATAGAGG GAGGAGGGAT TGCCTACATC GTCCGGGACA TTTCCGAGAG GAAGGAGGCA
GAAGAGAAGC TCCGGTACAT GAGCACCCAC GATGCACTCA CCGGCCTCTA CAATCGGGCC
TATTTCGATG AAGAACTGGC GAGGCTGGAA AAGGGGCGAC AGTTCCCGAT CAGCATCGTG
ATGTCGGACG TGGACGGCTT GAAGGCGGTG AATGACAAGA TGGGGCATGC ACATGGAGAT
GCATTACTGA AACAGGCCGC CAAGGCGTTG AAGGAAGTCT TTCGGGCTGA AGATGTAGTA
GCCAGGATTG GAGGCGACGA GTTTGCCGCG CTACTCCCCA GTACCGACGC TGCAGCCGTC
AAGGAAATCA TAAATCGGCT GAAAAAGAGC CTGGCCCACC ACAACGAAGC CAGCTCTGCA
AGCTCTGCCC CTCCCCTGAG CCTGTCAGTT GGAGTAGCCA TTGCAGAGAA CGGAGAAAAA
CTGATCGATA CCTGGAGATT GGCGGATGCA CGCATGTACC TTGACAAACG ATCGAGAACC
AGCAGAAGCA CGACTAAAGG CCCGCAAGCA GAACCGCCAC GGAAGACCAA GCCCTGA
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| Protein sequence | MRLGINGKCM SIPLRVLIVE DSPDDAELLL RELRHGGFDP SFQRVDTAEG MMSALEDQTW
DIVITDYVMP HFNGMAALNL LQEKGLDLPC IIVSGKIGED AAVEAMRGGA HDYFVKGQLA
RLIPAIKREL VEARIRQERK RDEEILRQQL AAMESSLDGM ATINRSGEFI YLNHAHAEIH
GYDTPEELIG KTWKGLYEER EVRRFENEIL PILCLNGKWR GEATGKKRNG TPFPEEISLA
LIEGGGIAYI VRDISERKEA EEKLRYMSTH DALTGLYNRA YFDEELARLE KGRQFPISIV
MSDVDGLKAV NDKMGHAHGD ALLKQAAKAL KEVFRAEDVV ARIGGDEFAA LLPSTDAAAV
KEIINRLKKS LAHHNEASSA SSAPPLSLSV GVAIAENGEK LIDTWRLADA RMYLDKRSRT
SRSTTKGPQA EPPRKTKP
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