| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_3976 |
|---|
| Symbol | |
|---|
| ID | 5166122 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | - |
|---|
| Start bp | 4619506 |
|---|
| End bp | 4620867 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640551453 |
|---|
| Product | UDP-N-acetylmuramoylalanine--D-glutamate ligase |
|---|
| Protein accession | YP_001232693 |
|---|
| Protein GI | 148265987 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
|---|
| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTAT TAAACAAGAA AATACTGGTA GTCGGTCTGG CCCGTACCGG GGTTGCCGTG
GCCCGTTTCC TGGCAGCGCG GGGGGCACGG GTCACCGTTA CCGACATGAA GGATGAAGCG
GCGCTCGCAC CGTTAATGGA GCAGCTCGCC GACCTGGATA TCGATTATGA GCTTGGCAGG
CACGAGAGGC ACAGCTTCCT CATGGCGGAC CTGGTTGTCG TCAGCCCCGG TGTGCCGATG
GATATCAAGC CGTTGCTGCT GGCCAAGGCC CAGCGCCGGA CGGTGATCAG CGAAATAGAA
CTGGCTGCCC GGTTTCTCAC AGCGCCCCTC GTTGCCATTA CCGGCACCAA CGGTAAAACC
ACCACTACGA CCCTGACCGG TGAGATTTTT GCTGCCTGCG GTTTCAAGAC CTTTGTCGGC
GGCAATATCG GTAACCCGCT CATCGAGCTC GTTACAAGCG GCGAAGCGGT TGACCGGGTA
GTGGTCGAAC TCAGTTCGTT CCAGCTTGAG GGAATCATCG ATTTTCGGCC GCAGGTGGCA
GTGCTGCTCA ATATCACCGA AGACCACCTG GACCGCTACG CAACCTACCA GGAGTATATC
GACGCCAAGC TGAGAATCTT CGAGAACCAG ACCAGCGCGG ATTATGCGGT GCTTAACATG
GATGACCCGC TCGTCGCCGC GTATGCCGGT AAAATGAAGG CGCGGGTGGT GCCCACAAGT
CAGCGGCAGG AGTTGGCGCA GGGGATTTTC TACCGCAACG GCTCCATAGT CTACCGCTGG
GAAGGGCGCG AGGAGCTTTT TGCAACCGCT TCCTTCCGGC TTAAAGGGGT GCATAACATC
GACAACATCA TGGCGGCGCT GGCAAGCACG CTGCTGATGG GGTGCGATGC GGGACAGGCA
CTGGCTGCCC TGGAGGCTTT TGCCGGTCTG CCTCACCGGA TGGAGTTCGT CCGTGAGGTG
AACGGCGTTG CCTGGTATGA GGACAGCAAG GGGACCAACG TGGGGAGCGT GGTCAAATCC
CTGGAGAGCT TCGACTCGGG GATAACCCTG ATTGCCGGCG GCAAGGACAA GGGGGGAGAG
TATACCCCGC TGGCCGGGCT GGTCAAGGAG CGGGTCGGCC ACCTCATCCT TATCGGCGAG
GCAAAAGAGA GGATGTGCAA CGCGTTGGGC TCCCTCACCG ATACCCATTT GGCCGATACG
CTGGAAGATG CGGTGGCGCT TGCGCACCGG CTGACTTCTC CGGGCGGGGT GGTTCTGTTC
TCTCCTGCCT GTTCCAGCTT TGACATGTTC AAGAACTATG AAGAGCGCGG GGAGTGCTTC
AAGTCCCTCG TCCGCTCTCT TGATGACGGA GCAGGGCGGT GA
|
|---|
| Protein sequence | MELLNKKILV VGLARTGVAV ARFLAARGAR VTVTDMKDEA ALAPLMEQLA DLDIDYELGR
HERHSFLMAD LVVVSPGVPM DIKPLLLAKA QRRTVISEIE LAARFLTAPL VAITGTNGKT
TTTTLTGEIF AACGFKTFVG GNIGNPLIEL VTSGEAVDRV VVELSSFQLE GIIDFRPQVA
VLLNITEDHL DRYATYQEYI DAKLRIFENQ TSADYAVLNM DDPLVAAYAG KMKARVVPTS
QRQELAQGIF YRNGSIVYRW EGREELFATA SFRLKGVHNI DNIMAALAST LLMGCDAGQA
LAALEAFAGL PHRMEFVREV NGVAWYEDSK GTNVGSVVKS LESFDSGITL IAGGKDKGGE
YTPLAGLVKE RVGHLILIGE AKERMCNALG SLTDTHLADT LEDAVALAHR LTSPGGVVLF
SPACSSFDMF KNYEERGECF KSLVRSLDDG AGR
|
|---|
| |