| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_3971 |
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| Symbol | |
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| ID | 5162799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter uraniireducens Rf4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009483 |
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| Strand | - |
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| Start bp | 4614030 |
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| End bp | 4614962 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640551448 |
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| Product | D-alanine--D-alanine ligase |
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| Protein accession | YP_001232688 |
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| Protein GI | 148265982 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACAGTTG ATGAACTGAA AACAAAAAAA ATAGGCGTGC TGATGGGGGG ACTGTCGGCG
GAGCGCGAGG TGTCCCTGAA AAGCGGCGCA GCCGTTCACC AGGCGCTTCT GGCAAGGGGC
TACGATGCCG TTGCCATAGA CGTTGACCGC GATATCGCCC AGGTGCTCGT CAGGGAATGG
GTGGATGTGG CATTTATAGC TCTCCACGGC CGCTATGGTG AGGATGGCGC TATCCAGGGT
CTTCTGGAAA TCATGGGAAT ACCCTATACC GGTTCCGGCG TCCTTGCCAG TGCCCTTGCC
ATGAACAAGA TTTTTGCCAA ACAGGCTTTT CAGGCGGCCA GACTGACCGT AGCCCCGTAC
AAGGTGTTTT GCCGAGGCGA TAAGGCCGCT CTTGCCGAGC TCGAATTTTC TCTTCCCGTC
GTGGTAAAGC CATCGCAGGA AGGTTCTTCG GTTGGTGTCA GCATCGTTAA GAAGGAGTCG
GAATTTGCCG CTGCCATGAA GGAGGCCTTC AGGTACGACC GTGAAATCCT CGTCGAGCAA
TTCATCAAGG GGAGCGAGGT CCAGGTGGGT ATCCTTGAAG ACAAGGCGCT CGGGGCCATT
GAGATCGTAC CGAAAAACGA ATTCTATGAT TTCGATGCAA AATACTCTCC CGGCATGGCC
GAGCATATTC TCCCCGCCCG ACTGCCGGCA GAGCTTTACC GAAAAGTGCT GCGGGCAGGA
GAAGATGCAC ACCGTGCCCT GGGCTGCAGC GGTTACAGCC GGGTCGATTT CCTCGTCACG
GAGGAAGGGG CATGCTATAT CCTGGAGGTC AATACCTTGC CCGGGATGAC CGATCTGAGC
CTGTTGCCGG AGATAGCCCG CGGCTCGGGA ATAGGATTCG AAGATCTGGT GGAAAGAATC
CTTGCTGCCG CGGCGTTGAA AATAAGCCAG TAG
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| Protein sequence | MTVDELKTKK IGVLMGGLSA EREVSLKSGA AVHQALLARG YDAVAIDVDR DIAQVLVREW
VDVAFIALHG RYGEDGAIQG LLEIMGIPYT GSGVLASALA MNKIFAKQAF QAARLTVAPY
KVFCRGDKAA LAELEFSLPV VVKPSQEGSS VGVSIVKKES EFAAAMKEAF RYDREILVEQ
FIKGSEVQVG ILEDKALGAI EIVPKNEFYD FDAKYSPGMA EHILPARLPA ELYRKVLRAG
EDAHRALGCS GYSRVDFLVT EEGACYILEV NTLPGMTDLS LLPEIARGSG IGFEDLVERI
LAAAALKISQ
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