Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gura_3947 |
Symbol | |
ID | 5165209 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter uraniireducens Rf4 |
Kingdom | Bacteria |
Replicon accession | NC_009483 |
Strand | - |
Start bp | 4592608 |
End bp | 4593210 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640551426 |
Product | membrane lipoprotein lipid attachment site |
Protein accession | YP_001232666 |
Protein GI | 148265960 |
COG category | [R] General function prediction only |
COG ID | [COG3417] Collagen-binding surface adhesin SpaP (antigen I/II family) |
TIGRFAM ID | [TIGR02722] uncharacterized proteobacterial lipoprotein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000000191679 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGATATC TACGTAGCTT GTTGCTCTGT CTTTCAATTG CCGCCATGTT TCTGGCCGGT TGCGCCACCA CCACTGTCCA GTATGGTGAT GCCGGATCGG CAAAGCCGAT CGGCACCGAT TTCGGCTCGT CCGATCTGCA GCAGATTGCC GAGGCAATGG TTGATTCCCT GATCACTTTT CCACCAGTAG CCGAGCAGAC CAGCCAGCGG CGACCCGTTT TGAGCGTGGA CAAGGTGAAG AACAAAACCA TGCAGCACAT AGATACGGAG TCGGTAACCG ACTCGATCAG GGCAAAACTG ATCAAATCCG GCAAGTTCCG TTTTATTGAC CGGACCACGG ATGAAGCAGC CGTAGAGGAG ATCAAGACCC AACAGGAAAG CGGCCTGGTT GATAAGAAGA CCGCCGTCGA GTTCGGCCGG CAGATCGGCG CGGAATTTCT GCTGACCGCA AATTTCGCTG AAATCGTGCA GAAGGCGGGC AGTGTTACAG ATGTCTATTA TAAGTTCACC ATGAACCTGA AGAACCTGAA AACGGGCATT CTCGAATGGT CGGACGAGAA GGAGATCCGC AAGATCTCCA AACGGTCCAT GTTTGGGGGG TAG
|
Protein sequence | MRYLRSLLLC LSIAAMFLAG CATTTVQYGD AGSAKPIGTD FGSSDLQQIA EAMVDSLITF PPVAEQTSQR RPVLSVDKVK NKTMQHIDTE SVTDSIRAKL IKSGKFRFID RTTDEAAVEE IKTQQESGLV DKKTAVEFGR QIGAEFLLTA NFAEIVQKAG SVTDVYYKFT MNLKNLKTGI LEWSDEKEIR KISKRSMFGG
|
| |