| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_3906 |
|---|
| Symbol | |
|---|
| ID | 5166624 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | - |
|---|
| Start bp | 4557115 |
|---|
| End bp | 4558005 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640551388 |
|---|
| Product | PP-loop domain-containing protein |
|---|
| Protein accession | YP_001232628 |
|---|
| Protein GI | 148265922 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1606] ATP-utilizing enzymes of the PP-loop superfamily |
|---|
| TIGRFAM ID | [TIGR00268] conserved hypothetical protein TIGR00268 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000000213353 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGTTAT ACATCTGTCA GAGGCGGCCC GTTCTTACGG GCCGTTCTTT ATTGAGGTCT
GCTATGGATG AATTGCACTT GAAATACGAG AAACTCAAGG GGCTCCTGCG GGAGATGGGC
TCCGTGCTGA TCGCCTTCTC CGGCGGGGTG GACTCCACCT TTCTCCTCAA GGTGGCCCAT
GACGTGCTGG GCGACAAGGC CTGCGCCATC ACCGCCACTT CACCCACCTA TCCCGAATCG
GAGTTTCGGC AGGCGGTTTC ACTGGCGAGG GAAATCGGCG CCAGGCAGAT CGTGATGGAA
TCGAACGAGC TCGAAATTCC CGGGTTTGCC GAAAATCCGA GGGATCGTTG CTATCACTGC
AAGAAAGAGC TGTTTCAGCT CTGCGTGGAA AAGGCTGCAT TGGAGGGATA CGCCTGCATT
GCCGACGGCA GCAATACCGA TGACCTGGGT GATTACCGGC CTGGGCGGAG GGCGGTGGGG
GAGCTGAAGG TGCGGAGTCC CTTGCTGGAG GCGGGTCTGT CCAAGGACGA TATCCGCGGG
TTGAGCCGAG AACTCGGTCT CCCCACCTGG GACAAGCAGC CGTATGCCTG TCTTGCCAGC
CGTTTCCCCT ACGGGGTGCA GATAACTTCT GAGCGGCTGG CGATGGTTGA ATCGTGCGAG
GAGTTTCTCA AGGAAAAAGG CTTTGCGGTC TACCGGGTGA GATTCCACAA TGAAACCGCC
CGGATCGAGC TGGCGGAAAA GGATATGGCG CGCTTTCTGG AAGCGGAAAT GCGCCATTCC
GTGGTGGAGT TTTTCAAAGG GGCCGGTTTT ACCTATGTGG CGCTGGATCT GGAGGGATAC
CGGACAGGAA GCATGAACGA AGTTGGAGAG GAACGAGGAT CGAGGCAATA G
|
|---|
| Protein sequence | MPLYICQRRP VLTGRSLLRS AMDELHLKYE KLKGLLREMG SVLIAFSGGV DSTFLLKVAH
DVLGDKACAI TATSPTYPES EFRQAVSLAR EIGARQIVME SNELEIPGFA ENPRDRCYHC
KKELFQLCVE KAALEGYACI ADGSNTDDLG DYRPGRRAVG ELKVRSPLLE AGLSKDDIRG
LSRELGLPTW DKQPYACLAS RFPYGVQITS ERLAMVESCE EFLKEKGFAV YRVRFHNETA
RIELAEKDMA RFLEAEMRHS VVEFFKGAGF TYVALDLEGY RTGSMNEVGE ERGSRQ
|
|---|
| |