Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gura_3888 |
Symbol | |
ID | 5165096 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter uraniireducens Rf4 |
Kingdom | Bacteria |
Replicon accession | NC_009483 |
Strand | - |
Start bp | 4538466 |
End bp | 4539869 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640551370 |
Product | RNA-directed DNA polymerase (Reverse transcriptase) |
Protein accession | YP_001232610 |
Protein GI | 148265904 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3344] Retron-type reverse transcriptase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.248408 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGACAG GAGCAGCAGA AGGCCGGGTT GGGATACCCG GCGCCAGCCC GGAGGGTAGC GGTTGGAAAC CGCGAGAGAA AGGGAGAGGT GCGGCAAACG TCACGGGAAG GAAAGCAGCT CACTGGCCGG AAGCGGCAAC GGGACTGATG GAGAAGATCG TCAGTCGCGG CAACATGATG GCGGCATACT CACGGGTAAT GCGCAACAAG GGAGCGCCCG GCGTCGATAA CATGCCGGTA ACGGCCCTGA AGGGCTACCT ACAGGAGGAA TGGCCGCGCA TCAGAGAAGA ACTGCTGACG GGAACGTATC ACCCGCAACC GGTGCGGAAA GTAGAAATTC CCAAACCGGG AGGCGGCACA CGGATGCTGG GAATTCCCAC CGTCCTTGAC CGACTCATTC AGCAGGCGGT GCATCAAGTT TTGAGCCCGC TGTTCGACCC TGGTTTCTCC ATAAGTTCCC ACGGGTTTCG CCCTGGACGG AGCGCCCATC AAGCGATCAA GGCAGCTCGG AAGTATGTAG AGAGCGGCCT TAGGTGGGTG GTTGACATTG ACCTTGAGAA ATTTTTCGAC CGAGTCCACC ACGACACCCT TATGTCGCTG GTGAAACGCA AGGTTGGAGA CCGTCTGGTG CTGTCCCTTA TCGACAGCTA CCTTAAGGCA GGGATACTTG AAGGAGGAGT GACGTCACCC CGGTTGGAAG GCACGCCGCA AGGCGGGCCT CTCTCGCCGC TGCTGTCCAA CATCCTCCTC GACGAACTGG ACAAGAAACT GGAAAGAAGG GGCCATAAGT TCTGCCGCTA TGCCGACGAC GCAAATATCT ATGTTGCAAC GAGGAGAAGC GGCGAGCGTG TCATGGCCTC AATTACCGGC TACCTGTCCG AGCGGCTCAA GCTCACGGTC AACCAGGGCA AAAGCGCGGT TGACCGTCCG TGGAAAAGGT CGTTTCTGAG TTACAGCATG ACCCGGCACC GCAAACCGCG GCTTACCGTG GCCAAGAAAG CGGCTGCCAG GCTCAAGGCC AACCTCAAGA CGATCTTTAG GCGGGGAAGG GGTCAGAACA TCCAAACCAC CGTTGAAGAG ACAACCCCGA AACTTAGGGG TTGGTTAAAC TACTTTCGGT ACGCGGAAGT AAAAGGCATC TTCGAGGAAC TGGACGGATG GCTGAGACGT AAACTGCGTC GCATTCTCTG GAAGCAGTGG AAGCGCCCCA AGACGCGAGC AAAGAAACTG ATGCGGCGGG GATTATCGGA GGCAACTGCA TGGCGGTCGG CCACAAACGG CCGCGGCCCC TGGTGGAATG CAGGGGCCGC GCATATGAAC AAAGCTGTTC CGAAATTCTA CTTCGACAAA CTGGGGCTGG TATCACTCAT AGACCAGCTT CACCGACTTC AACGTACTTC ATGA
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Protein sequence | MTTGAAEGRV GIPGASPEGS GWKPREKGRG AANVTGRKAA HWPEAATGLM EKIVSRGNMM AAYSRVMRNK GAPGVDNMPV TALKGYLQEE WPRIREELLT GTYHPQPVRK VEIPKPGGGT RMLGIPTVLD RLIQQAVHQV LSPLFDPGFS ISSHGFRPGR SAHQAIKAAR KYVESGLRWV VDIDLEKFFD RVHHDTLMSL VKRKVGDRLV LSLIDSYLKA GILEGGVTSP RLEGTPQGGP LSPLLSNILL DELDKKLERR GHKFCRYADD ANIYVATRRS GERVMASITG YLSERLKLTV NQGKSAVDRP WKRSFLSYSM TRHRKPRLTV AKKAAARLKA NLKTIFRRGR GQNIQTTVEE TTPKLRGWLN YFRYAEVKGI FEELDGWLRR KLRRILWKQW KRPKTRAKKL MRRGLSEATA WRSATNGRGP WWNAGAAHMN KAVPKFYFDK LGLVSLIDQL HRLQRTS
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