| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_3860 |
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| Symbol | |
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| ID | 5166978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter uraniireducens Rf4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009483 |
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| Strand | - |
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| Start bp | 4511246 |
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| End bp | 4512865 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640551343 |
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| Product | D-3-phosphoglycerate dehydrogenase |
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| Protein accession | YP_001232583 |
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| Protein GI | 148265877 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000678395 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTCA TCGTTACCGA TGAGGTTGCA CCTGAAGGTC TGGCGCTTTT GGCGCAGGAT
CCGCGGGTGG AGATGGATAT CCGCCTGGGG CTGAAAAAAG AAGAGCTGCT GGCGATTATC
GGGGATTACG AGGCCATTAT CACCAGAAGC GGGACAAACG TGGACCGGGA CCTGCTGGAT
GCGGCCAAAA AACTGAAAAT GGTGGCCAGG GCCGGAGTCG GCATCGATAA CGTCGATGTG
GATTACGCCA GCGCCAGAGG GGTGATCGTG GTCAACGCCC CGTTCGGCAA CACCAACAGC
GCTGCTGAGC ATACCATGGC GCTTTTGCTC GCTTTCTACC GCAACATAAC CAAGGCCAAT
GCCAGCCTGA AGAGCGGCGA GTGGAAGCGC GCCCCGTTCA CCGGTTATGA GCTCAAGGGG
CGGACTGCCG GCGTAATCGG ACTGGGTAAG GTCGGGGGTC GGGTTGCCAC CCGTCTGAAG
GCGTTCGAGT GTGAGGTGCT GGCCTGCGAT CCGTACGTGG CCGTGAAACG GGCACACGAT
CTGGGTGTCA GGCTGGTTTC GCACGAAGAG ATTTACAGAA ATTGCGACAT TATTACCATC
CACACCCCTC TGAACGGGGA GACGCTCGAC ATGATCGGCG AAAAAGAAAT CGCCATGATG
AAAGAGGGCG TGGTCCTCAT CAATGCCGCA CGTGGCGGCA TCTTCAACGA GCAGGCGCTG
TTGAACGCGC TGCAGACGGG TAAGGTGGCA GGCGCGGCGG TGGACGTATG GAGCGAGGAA
CCACCTAGAA CCGAGCTGTT GAAGGAGTTG ATCGCTCAAC AAAGGCTGGT GGTGACCCCC
CACCTGGGGG CCAATACCTT CGAGGCCCAG ATCAATGTGG CTGTGGACGT TTCCAGGGAG
ATCCTCAATT ACCTTGACGA TCAGCCGCTG GAGAACGCGG TCAACATCCC CCGTTTCGAC
CTGACGCTCA TGGAGCAGAT GCGTCCCTTC CTCAACCTGG TGAAGGTGAT GTGCGATCTG
GCATTCCAGC TGGTTGACGA CAATCCGGCA AAGCTAGCCT TCGGCTATGC AGGCGCAATT
GCCCACTATG ACTGCTCACC GCTTACGGTC TGTGGCCTGG CGGCGATTCT CAACCTGGTC
GTCGATCAGG AGGTCAACAT GGTGAACGCC CCGCTGATCG CGGAAAACAT GGGAATCGTC
GTTGAAGAAC ATAAATCGAC CCGCGCCGAT GCCTTTTCCA ACATGGTCAC CCTGACTGTC
GAAGGTCAGG GAAAGCGGCG GCTGCTCTCG GGGACTCTTT TTGAAGGTGC GCCCCGCATT
GTGCGTCTGA GGGACTACGC CATGGACTTC AGCCCGGAAG GGCACATGCT GCTGCTCAAC
TATATTGACC GCCCCGGCAT GATAGGCCGG ATCGGAACCA TTTTGGGCAC CCGCGACATC
AACATCGCTT CAATGAATTT GGGCCGTCGG GAGAAAAAGG GCGAAGCGAT GGTCATACTA
TCCCTTGATT CGGCCGTGCC GCCGGATGTG GTCGAGGAGC TGCGCAATGC CACTAATGCC
ACCTTCATCA GGCCGCTCAA CATGACGAGT GCCGGCCGTA GTCGTGGCTT CACCGGATAA
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| Protein sequence | MKVIVTDEVA PEGLALLAQD PRVEMDIRLG LKKEELLAII GDYEAIITRS GTNVDRDLLD
AAKKLKMVAR AGVGIDNVDV DYASARGVIV VNAPFGNTNS AAEHTMALLL AFYRNITKAN
ASLKSGEWKR APFTGYELKG RTAGVIGLGK VGGRVATRLK AFECEVLACD PYVAVKRAHD
LGVRLVSHEE IYRNCDIITI HTPLNGETLD MIGEKEIAMM KEGVVLINAA RGGIFNEQAL
LNALQTGKVA GAAVDVWSEE PPRTELLKEL IAQQRLVVTP HLGANTFEAQ INVAVDVSRE
ILNYLDDQPL ENAVNIPRFD LTLMEQMRPF LNLVKVMCDL AFQLVDDNPA KLAFGYAGAI
AHYDCSPLTV CGLAAILNLV VDQEVNMVNA PLIAENMGIV VEEHKSTRAD AFSNMVTLTV
EGQGKRRLLS GTLFEGAPRI VRLRDYAMDF SPEGHMLLLN YIDRPGMIGR IGTILGTRDI
NIASMNLGRR EKKGEAMVIL SLDSAVPPDV VEELRNATNA TFIRPLNMTS AGRSRGFTG
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