| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_3854 |
|---|
| Symbol | |
|---|
| ID | 5165194 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | + |
|---|
| Start bp | 4503902 |
|---|
| End bp | 4506391 |
|---|
| Gene Length | 2490 bp |
|---|
| Protein Length | 829 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640551337 |
|---|
| Product | glycogen/starch/alpha-glucan phosphorylase |
|---|
| Protein accession | YP_001232577 |
|---|
| Protein GI | 148265871 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0058] Glucan phosphorylase |
|---|
| TIGRFAM ID | [TIGR02093] glycogen/starch/alpha-glucan phosphorylases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAATC AGGACGAAGT AAGTACAGGG GAGAAGTGCC GGAACATCCG CACCGGATCG
AGTCCCGACG ACATTGCCCA GGCGTTTCTC GACAATCTTT ACTATGCCCA GGGGAGGATA
CCGGTCCTCG CCACGCGAAA CGACCTGTAC ATGGCGCTTG CCTATACGGT CCGCGACCGG
CTTGCGGCCC GCTGGGTCGC GCAGATGCAG CAATTTCGGC GAGCGGAATT GAAAAAAAGC
ATCAAGGTGG TCTGCTACCT TTCGGCGGAG TTTCTTCCCG GGCCGCACCT GGGCAACAAT
CTGCTCAACC TGGGGATTTA CGATGAAACG CGCCAGGCCA TGGAGCAGCT CGGGTACAAT
CTGGAGGAGC TCATCGATCA GGAAACCGAG CCGGGGCTCG GTAACGGCGG GCTCGGCAGG
CTTGCCTCCT GTTTCATGGA TTCGCTTTCG ACGATCGTGG TCCCGGCGTT CGGCTACGGG
ATACGCTACG AGTTCGGCAT CTTCGACCAG GAGATACGCG ACGGCTGGCA GGTGGAGATT
ACCGACAAGT GGCTGAAGCT CGGGAATCCC TGGGAAATGC CGCTCCCTGA ATTGTGCCAG
GAGGTGAAAC TAGGCGGCCA CACGGAACAT TACCAGGACG GACAGGGGCG GTCGCGGGTG
CGGTGGATCC CGGCCGGGGT GGTCGAGGGG ATCCCCTACG ACACGCCGAT CCTGGGGTAT
GGCGGCAATA TCTGCAATAC GCTCCGCCTC TGGAAGGCCG AAGCGGTGGA ATCGTTCGAC
TTCCAGGACT TCAACGTGGG CAACTATTAT GCAGCGGTCG AAGAAAAGGT AAAGTCGGAA
ACCATCACCA AGGTCCTCTA TCCCAACGAC GAACCGGAGA TCGGCAAGAT GCTCCGGCTC
ATCCAGGAAT ACTTTTTCGT CTCCTGTTCG CTGCAGGACA TGATCCGCAT CGGCAAGATG
CTGGGCAATT CTCCAGAATG TTTTGACCAG CGGTACGTGG CCCAGCTGAA CGACACCCAT
CCCTCCATCG CCGTTGCCGA ACTGATGAGA CTCCTGGTGG ACGAGCACGA CGTGGCGTGG
GAGAAGGCGT GGGAGATAAC GCAGAACACC TTCGGCTACA CCAATCACAC CCTCCTTCCC
GAAGCTTTGG AGAAATGGCC CGTCGAACTG TTCGGCCAGA TCCTCCCGCG GCACCTGGAG
ATCGTTTACG AGATCAACCG CCGCTTCCTC GACCAGGTGA GGTTGGCGTT TCCAGGAGAC
GAAGAGCAGG CGGCGCGTCT GTCACTCATC GACGAATCCG GCTGCAGGTA CGTGCGGATG
GCCCACTTGG CCTGCGTTGG GTGCCATGCC GTCAACGGCG TCGCAAAGCT CCACTCAGAG
CTTTTGAAGA GCGAGGTGCT GCGGGACTTC CATGAAATGT TCCCGGAGAA ATTCCATAAT
GTGACCAACG GCGTCACCCC GCGCCGCTGG ATGGCGCTCT CCAACCCGCG GCTTGCCGCG
CTGATTTCCG GGGTTATCGG CGATGGCTGG ATCACACAAC TGGACGAGCT GAGAAAGCTC
GAGCCCTTTG CCGACGATCC CGCGTTCCAG GAGAAGTGGC GCCGGGTCAA GCGGGAGAAC
AAGAACGACC TCGCCACCCT TATCCTGAAC CGCACCGGGG TGGCGGTCGA TCCCGATTCA
CTCTTCGACA TCCAGGTAAA ACGCCTGCAC GAATACAAGC GCCAGCACCT GAACGTCCTG
CACATCATCA CCCTCTATGC AAGGCTGAAG CGGTACCCTG CATCCGACTG CGTTCCCAGG
ACGTTCGTCT TCGGCGGCAA GGCCGCGCCC GGATACGCCA TGGCCAAACT CATCATCAAG
CTCATCAATT CCGTGGCCGG GGTGGTGAAC ACCGATCCCG ATATCCGCGG CCGGTTGAAT
GTGGCCTTTC TCCCCGATTT CAACGTGAAG ACCGGCCAGC AAGTGTATCC GGCAGCGGAC
CTGTCCGAAC AGATATCCCT GGCAGGCGAA GAGGCGTCGG GAACGGGCAA CATGAAATTT
TCCATGAACG GGGCGCTGAC CATCGGCACC CTCGACGGAG CCAACGTGGA AATACGTGAA
GAGGTAGGAG CCGAGAATTT TTTCCTCTTC GGCCTGAAGG TGGACGAGGT GGAGGAGCTG
AAGGCGCGGG GGTACGACCC GAGAAAATAT TACGACTCCA ACCCCGCCCT TCGGGAAGCG
ATCGACCTCA TCCGTTCGGG ACATTTCTCC GGGGGGAACG CACAGCTCTT CGCGCCGCTC
GTCGACTTGC TCATGCAGCG CGACAATTAC ATGCTTTTTG CGGATTACCA GCCGTACATC
GACTGCCAGG ACCGGGTGTC GGCGGCCTTC CGCGACCAGC AAAACTGGAC GAGGATGTCC
ATCCTGAACG TGGCGCGGAT GGGGAAATTT TCCTCCGACC GCGCAGTTCG GGAATACTGC
GACATGATTT GGAAGGTGCA GCCGGTGTAA
|
|---|
| Protein sequence | MENQDEVSTG EKCRNIRTGS SPDDIAQAFL DNLYYAQGRI PVLATRNDLY MALAYTVRDR
LAARWVAQMQ QFRRAELKKS IKVVCYLSAE FLPGPHLGNN LLNLGIYDET RQAMEQLGYN
LEELIDQETE PGLGNGGLGR LASCFMDSLS TIVVPAFGYG IRYEFGIFDQ EIRDGWQVEI
TDKWLKLGNP WEMPLPELCQ EVKLGGHTEH YQDGQGRSRV RWIPAGVVEG IPYDTPILGY
GGNICNTLRL WKAEAVESFD FQDFNVGNYY AAVEEKVKSE TITKVLYPND EPEIGKMLRL
IQEYFFVSCS LQDMIRIGKM LGNSPECFDQ RYVAQLNDTH PSIAVAELMR LLVDEHDVAW
EKAWEITQNT FGYTNHTLLP EALEKWPVEL FGQILPRHLE IVYEINRRFL DQVRLAFPGD
EEQAARLSLI DESGCRYVRM AHLACVGCHA VNGVAKLHSE LLKSEVLRDF HEMFPEKFHN
VTNGVTPRRW MALSNPRLAA LISGVIGDGW ITQLDELRKL EPFADDPAFQ EKWRRVKREN
KNDLATLILN RTGVAVDPDS LFDIQVKRLH EYKRQHLNVL HIITLYARLK RYPASDCVPR
TFVFGGKAAP GYAMAKLIIK LINSVAGVVN TDPDIRGRLN VAFLPDFNVK TGQQVYPAAD
LSEQISLAGE EASGTGNMKF SMNGALTIGT LDGANVEIRE EVGAENFFLF GLKVDEVEEL
KARGYDPRKY YDSNPALREA IDLIRSGHFS GGNAQLFAPL VDLLMQRDNY MLFADYQPYI
DCQDRVSAAF RDQQNWTRMS ILNVARMGKF SSDRAVREYC DMIWKVQPV
|
|---|
| |