Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gura_3761 |
Symbol | |
ID | 5166227 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter uraniireducens Rf4 |
Kingdom | Bacteria |
Replicon accession | NC_009483 |
Strand | - |
Start bp | 4401372 |
End bp | 4401893 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640551246 |
Product | 16S rRNA processing protein RimM |
Protein accession | YP_001232487 |
Protein GI | 148265781 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000000217474 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCAGCG GTAACGAAAC AGTTCTGATC GGTAAGGTCT CGGCAACACA CGGGGTCAGG GGGCAATTGC GTATCACCCC CTTTTCCGGC GACGTGGATA GCCTGCTGAC ATTGCGATCG ATTATGGTGA AAAAGCCTGG CGGGGAGATG GAAATCTTTG CAGTTGCGGC TTCCAAGGCC CACGGCAAAA AGGTCATTAT TACCCTTAAG GCGTTTGATA ATATAAATCA GGTGCTTCAT CTGGTGGGGC GAGAATTGTA CGCCCTGCGC GAGCAGTTGC CGGAACTTCC CGAAGACGAG TATTACTGGT GCGACCTTTT GGGGTTGCAG GTGGTAACCG AAGAGGGGGA GTCTCTCGGA GAACTGGTGG ATATTATCGT GACCGGTAGT AATGACGTTT ATGTGGTCCA GGGGAGCGGA CGGGAGATAC TCATTCCTGC CCTGGCGGAT GTTGTGCTGG ATGTGGATTC GGATGCAAAA CGTATGACAG TCAGCCTGCC CGAGGGGCTG CTCGATCTAT GA
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Protein sequence | MSSGNETVLI GKVSATHGVR GQLRITPFSG DVDSLLTLRS IMVKKPGGEM EIFAVAASKA HGKKVIITLK AFDNINQVLH LVGRELYALR EQLPELPEDE YYWCDLLGLQ VVTEEGESLG ELVDIIVTGS NDVYVVQGSG REILIPALAD VVLDVDSDAK RMTVSLPEGL LDL
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