Gene Gura_3745 details

Gene Information

• Locus tag: Gura_3745
• ID: 5163358
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter uraniireducens Rf4
• Kingdom: Bacteria
• Replicon accession: NC_009483
• Strand: -
• Start bp: 4386098
• End bp: 4388143
• Gene Length: 2046 bp
• Protein Length: 681 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 640551230
• Product: diguanylate cyclase
• Protein accession: YP_001232471
• Protein GI: 148265765
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG2199] FOG: GGDEF domain
• TIGRFAM ID: [TIGR00254] diguanylate cyclase (GGDEF) domain

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAAAGA ACTCCATGAA AACCCAGCCT GTGGAGCTGT TGGCGGCGCT CAAAAGCTAT 
CTGTTTCTTG CTCCTTACAA TCTTACACTC TATTACAGGG AAAACGGGGC CGTGGACTCC 
TTTGGAGATG GTTTTAAGTC CTGCGGTGCA ATAATTCAGG ACCAATTAAG CAATGATATG 
TGTCATCATT TCTTTGAAAA AAATATCAAA GCTGATTTGA AAACCAAGAA AACGACCGTT 
TACCGATATA GTGGGGGGTT TCTCAGTTTT GTTGTGCCAT TCGATATCAG TGATACTTCG 
TTTTGCCTGA TCGGGAATGG GGTGAGGGAT AAATCGATTG ATCTCTGGCA GCTGGAAACC 
CTGGCCAGGG GAGAGAAAGT TGATGGCTTT TCACTGCTGA ACCAGTTGGA AAAGCTACCC 
GTTACAACCG TTCAGGAGAT GGAAGAGGTT GCTGAGCAAA TTCAGAAGAT GTTGCCGTCA 
CTTCAGGTGG ACAGGTTCTA TAAATCACTT TTCGACAAAA CCATGCGGCA GCTGTCGACA 
ATTGTCGGAA TCCTGGAGCA GTTGGATAAG GTTGCGACAA TTGAAGAAAC TATTTCCCTC 
TCCAGCGAAA TGCTGGGGTT TCTTTTCAAT TTTCCCAAGA TTGCCATTGC ATTACGCGAT 
GAGGACGGCA AGGCATTTTC AATGGCGGGG ACATGGGGCC TGCCTGAGAA ATTGGGGAGT 
ATCCCCGAGG AAAATATTGC AGTATTGGTT TCTCCGGATA AAGTCAAAAA AACGGTTAGG 
TTTGGTAAGG AGTTAAGGGG TTTATTCCCC GGATTGAAAG CTGATCGCGT AACTTGTTTT 
CCCTTGGAAT CAGAGGGACA GCTGTTTGGG GTTATTGCCC TTTTCGACAG TGAGCTGCAG 
ACTGTTGATC TTTTGCTTAT AGAACTCGTT GCTTCTAAGG TTGCTGCCAA GCTGATGCAG 
CTAAAAAGGG AGGCGGAGCA TCTTCAGGTG AGTTTGTTGA CGAACAAACT GATGTCGCTG 
ACCAATATTC TCCTTTTTGC AGAAAGTAAG GAAGAGCTTT ACAAGATCAT ACTGGAAATA 
GCCGCAGACC TGCTCAGTGC TTGTCAAGGG TCGATCATGC TGATCGACAA AAAAGGAGAA 
AATCTCCATA TTGTTTTCAG TATGGGAATG AGTCTGCAAG TTGCTCAATG CATGACCGTC 
AAGGTCGGGA AAGGGATAGC CGGTAAGGTG GCTAAAACCG GGACACCGCT TCTGGTAAAT 
GATGTGGAAA AAGATAGCAG GGTCGGTATG AAAAACCGCC CACGCTTCAA ATCCAAATCT 
CTGATATGCA TACCGTTGAA ACTAAAGGAT AAGATCATCG GCGTCTTGAA CCTTTCCGAT 
AAGGAAAACC TCGGCGCGTT TACCGAGGCT GATATGAACC TCTTGACATC TTTTGCAAAC 
CTCGCTTCTT TGATGATTGA GCGCACACTC GTGCTGGAAC AATCTTCCAT GTTCGAGAAG 
CTTTCGGTAA CTGATCCGCT GACAGGGCTT TATAACCGAC GCTTCCTGAA AAATCGCCTT 
GAGGAAGAAT TGAATCGCAG TGTCCGCCAC GGACTCAACC TGACGTTCCT GTTTATAGAT 
CTCGATTATT TCAAGATTTA CAATGACTTT TGCGGCCATC TTGCCGGGGA TGAGGCTCTG 
AAGAAGACAG CGGATATCAT CAAGGCGTCA CTACGCGACA TGGATATCGT TGCCCGCTAT 
GGTGGTGAGG AGTTCTGCGC CATTCTGCCC GGTACCTCAA AGAAGGAGTC AATAGTGGTT 
GCCGAACGGA TAAGGGTGGG GATTGAAAAG GAGATATTTC CGGAAGAAGA AAGTCTCCCC 
CTTGGTAAAT TGACAGCGAG TCTGGGTATC GCTTCTTTTC CGGAAGACGG CCATACTTTT 
ACTTCCCTTG TTCATGCGGC CGATGTTGCT CTTTATGAGG CAAAGGCTAA CGGACGTAAC 
CAGATAATCG CGGCTTATCC TTCAATGCCG AACGACTCAA AAAGCGGCCT TCACAACAAT 
CAATAA 

 

Protein sequence

MEKNSMKTQP VELLAALKSY LFLAPYNLTL YYRENGAVDS FGDGFKSCGA IIQDQLSNDM 
CHHFFEKNIK ADLKTKKTTV YRYSGGFLSF VVPFDISDTS FCLIGNGVRD KSIDLWQLET 
LARGEKVDGF SLLNQLEKLP VTTVQEMEEV AEQIQKMLPS LQVDRFYKSL FDKTMRQLST 
IVGILEQLDK VATIEETISL SSEMLGFLFN FPKIAIALRD EDGKAFSMAG TWGLPEKLGS 
IPEENIAVLV SPDKVKKTVR FGKELRGLFP GLKADRVTCF PLESEGQLFG VIALFDSELQ 
TVDLLLIELV ASKVAAKLMQ LKREAEHLQV SLLTNKLMSL TNILLFAESK EELYKIILEI 
AADLLSACQG SIMLIDKKGE NLHIVFSMGM SLQVAQCMTV KVGKGIAGKV AKTGTPLLVN 
DVEKDSRVGM KNRPRFKSKS LICIPLKLKD KIIGVLNLSD KENLGAFTEA DMNLLTSFAN 
LASLMIERTL VLEQSSMFEK LSVTDPLTGL YNRRFLKNRL EEELNRSVRH GLNLTFLFID 
LDYFKIYNDF CGHLAGDEAL KKTADIIKAS LRDMDIVARY GGEEFCAILP GTSKKESIVV 
AERIRVGIEK EIFPEEESLP LGKLTASLGI ASFPEDGHTF TSLVHAADVA LYEAKANGRN 
QIIAAYPSMP NDSKSGLHNN Q