Gene Gura_3745 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGura_3745 
Symbol 
ID5163358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter uraniireducens Rf4 
KingdomBacteria 
Replicon accessionNC_009483 
Strand
Start bp4386098 
End bp4388143 
Gene Length2046 bp 
Protein Length681 aa 
Translation table11 
GC content46% 
IMG OID640551230 
Productdiguanylate cyclase 
Protein accessionYP_001232471 
Protein GI148265765 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAGA ACTCCATGAA AACCCAGCCT GTGGAGCTGT TGGCGGCGCT CAAAAGCTAT 
CTGTTTCTTG CTCCTTACAA TCTTACACTC TATTACAGGG AAAACGGGGC CGTGGACTCC
TTTGGAGATG GTTTTAAGTC CTGCGGTGCA ATAATTCAGG ACCAATTAAG CAATGATATG
TGTCATCATT TCTTTGAAAA AAATATCAAA GCTGATTTGA AAACCAAGAA AACGACCGTT
TACCGATATA GTGGGGGGTT TCTCAGTTTT GTTGTGCCAT TCGATATCAG TGATACTTCG
TTTTGCCTGA TCGGGAATGG GGTGAGGGAT AAATCGATTG ATCTCTGGCA GCTGGAAACC
CTGGCCAGGG GAGAGAAAGT TGATGGCTTT TCACTGCTGA ACCAGTTGGA AAAGCTACCC
GTTACAACCG TTCAGGAGAT GGAAGAGGTT GCTGAGCAAA TTCAGAAGAT GTTGCCGTCA
CTTCAGGTGG ACAGGTTCTA TAAATCACTT TTCGACAAAA CCATGCGGCA GCTGTCGACA
ATTGTCGGAA TCCTGGAGCA GTTGGATAAG GTTGCGACAA TTGAAGAAAC TATTTCCCTC
TCCAGCGAAA TGCTGGGGTT TCTTTTCAAT TTTCCCAAGA TTGCCATTGC ATTACGCGAT
GAGGACGGCA AGGCATTTTC AATGGCGGGG ACATGGGGCC TGCCTGAGAA ATTGGGGAGT
ATCCCCGAGG AAAATATTGC AGTATTGGTT TCTCCGGATA AAGTCAAAAA AACGGTTAGG
TTTGGTAAGG AGTTAAGGGG TTTATTCCCC GGATTGAAAG CTGATCGCGT AACTTGTTTT
CCCTTGGAAT CAGAGGGACA GCTGTTTGGG GTTATTGCCC TTTTCGACAG TGAGCTGCAG
ACTGTTGATC TTTTGCTTAT AGAACTCGTT GCTTCTAAGG TTGCTGCCAA GCTGATGCAG
CTAAAAAGGG AGGCGGAGCA TCTTCAGGTG AGTTTGTTGA CGAACAAACT GATGTCGCTG
ACCAATATTC TCCTTTTTGC AGAAAGTAAG GAAGAGCTTT ACAAGATCAT ACTGGAAATA
GCCGCAGACC TGCTCAGTGC TTGTCAAGGG TCGATCATGC TGATCGACAA AAAAGGAGAA
AATCTCCATA TTGTTTTCAG TATGGGAATG AGTCTGCAAG TTGCTCAATG CATGACCGTC
AAGGTCGGGA AAGGGATAGC CGGTAAGGTG GCTAAAACCG GGACACCGCT TCTGGTAAAT
GATGTGGAAA AAGATAGCAG GGTCGGTATG AAAAACCGCC CACGCTTCAA ATCCAAATCT
CTGATATGCA TACCGTTGAA ACTAAAGGAT AAGATCATCG GCGTCTTGAA CCTTTCCGAT
AAGGAAAACC TCGGCGCGTT TACCGAGGCT GATATGAACC TCTTGACATC TTTTGCAAAC
CTCGCTTCTT TGATGATTGA GCGCACACTC GTGCTGGAAC AATCTTCCAT GTTCGAGAAG
CTTTCGGTAA CTGATCCGCT GACAGGGCTT TATAACCGAC GCTTCCTGAA AAATCGCCTT
GAGGAAGAAT TGAATCGCAG TGTCCGCCAC GGACTCAACC TGACGTTCCT GTTTATAGAT
CTCGATTATT TCAAGATTTA CAATGACTTT TGCGGCCATC TTGCCGGGGA TGAGGCTCTG
AAGAAGACAG CGGATATCAT CAAGGCGTCA CTACGCGACA TGGATATCGT TGCCCGCTAT
GGTGGTGAGG AGTTCTGCGC CATTCTGCCC GGTACCTCAA AGAAGGAGTC AATAGTGGTT
GCCGAACGGA TAAGGGTGGG GATTGAAAAG GAGATATTTC CGGAAGAAGA AAGTCTCCCC
CTTGGTAAAT TGACAGCGAG TCTGGGTATC GCTTCTTTTC CGGAAGACGG CCATACTTTT
ACTTCCCTTG TTCATGCGGC CGATGTTGCT CTTTATGAGG CAAAGGCTAA CGGACGTAAC
CAGATAATCG CGGCTTATCC TTCAATGCCG AACGACTCAA AAAGCGGCCT TCACAACAAT
CAATAA
 
Protein sequence
MEKNSMKTQP VELLAALKSY LFLAPYNLTL YYRENGAVDS FGDGFKSCGA IIQDQLSNDM 
CHHFFEKNIK ADLKTKKTTV YRYSGGFLSF VVPFDISDTS FCLIGNGVRD KSIDLWQLET
LARGEKVDGF SLLNQLEKLP VTTVQEMEEV AEQIQKMLPS LQVDRFYKSL FDKTMRQLST
IVGILEQLDK VATIEETISL SSEMLGFLFN FPKIAIALRD EDGKAFSMAG TWGLPEKLGS
IPEENIAVLV SPDKVKKTVR FGKELRGLFP GLKADRVTCF PLESEGQLFG VIALFDSELQ
TVDLLLIELV ASKVAAKLMQ LKREAEHLQV SLLTNKLMSL TNILLFAESK EELYKIILEI
AADLLSACQG SIMLIDKKGE NLHIVFSMGM SLQVAQCMTV KVGKGIAGKV AKTGTPLLVN
DVEKDSRVGM KNRPRFKSKS LICIPLKLKD KIIGVLNLSD KENLGAFTEA DMNLLTSFAN
LASLMIERTL VLEQSSMFEK LSVTDPLTGL YNRRFLKNRL EEELNRSVRH GLNLTFLFID
LDYFKIYNDF CGHLAGDEAL KKTADIIKAS LRDMDIVARY GGEEFCAILP GTSKKESIVV
AERIRVGIEK EIFPEEESLP LGKLTASLGI ASFPEDGHTF TSLVHAADVA LYEAKANGRN
QIIAAYPSMP NDSKSGLHNN Q