| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_3739 |
|---|
| Symbol | |
|---|
| ID | 5163706 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | - |
|---|
| Start bp | 4380337 |
|---|
| End bp | 4380849 |
|---|
| Gene Length | 513 bp |
|---|
| Protein Length | 170 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640551224 |
|---|
| Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
|---|
| Protein accession | YP_001232465 |
|---|
| Protein GI | 148265759 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1225] Peroxiredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0260987 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGA TTATTTTTGC TGTGATGATT TTATTTAGTG TTGCGGTTAT CGGTTGTTCC
CGCCAGGAGG AGCCGGTCAT AGAAGGGAAG GTGGCGCCCG ATTTCACCTT GAAGGATTTA
GCCGGCCGTC AGGTACGCCT TTCGGACTTC AGGGGGAAGG TTGTCTTCCT CAATTTCTGG
GCGACCTGGT GTCCTCCCTG TCGTGAAGAA ATCCCGTCCA TGGTCAGACT GGATCGGATG
ATGGCCGGGA AACCTTTCCA AATGCTGGCC GTATCCATCG ATGAGGGGGG TAAGGACGCT
GTAAAGCGAT TTTTCAAGAA TTCGGGGGCG GCGTTGCCGG CACTCCTTGA TACCGACCAG
GCGATCAGTA AACGCTATGG AACTACCGGG GTACCGGAAA CCTTTATATT GGACAAAAAG
GGTGTTATAG TAAAAAAAGT TGTTGGCGGT ATGGATTGGA GTGATCCGCA GGTGGTAGCT
TTTTTCAATG AGATCATGAA GCCGCAGATG TAA
|
|---|
| Protein sequence | MKKIIFAVMI LFSVAVIGCS RQEEPVIEGK VAPDFTLKDL AGRQVRLSDF RGKVVFLNFW
ATWCPPCREE IPSMVRLDRM MAGKPFQMLA VSIDEGGKDA VKRFFKNSGA ALPALLDTDQ
AISKRYGTTG VPETFILDKK GVIVKKVVGG MDWSDPQVVA FFNEIMKPQM
|
|---|
| |