Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gura_3721 |
Symbol | |
ID | 5162988 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter uraniireducens Rf4 |
Kingdom | Bacteria |
Replicon accession | NC_009483 |
Strand | - |
Start bp | 4352732 |
End bp | 4354393 |
Gene Length | 1662 bp |
Protein Length | 553 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640551206 |
Product | dihydroxy-acid dehydratase |
Protein accession | YP_001232447 |
Protein GI | 148265741 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism |
COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000618938 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCAGTG ATATGATAAA AAAAGGTCTG GAGCGGACTC CGCACCGGGC GCTTTTGAAG GGGACCGGCG TCCCGCAGAG CGAGATGGAT AAGCCTTTTA TCGGTGTGGC CACCAGTTTC ACCGACCTGA TTCCCGGTCA TGTGGGGATG CGGGACCTTG AGCGCTTCAT TGAAAAGGGG ATACACACCG GCGGCGGCTA TGCCTTTTTC TTCGGCATTC CCGGTGTCTG CGACGGCATA TCCATGGGGC ACAAGGGGAT GCATTACAGC CTGCCGACCC GCGAACTGAT CGCCGACATG GTGGAGTCGG TCGCCGAGGC CCACCGTCTC GACGGCCTTG TGCTGCTGAC CAATTGCGAC AAGATTACCC CCGGCATGCT GATGGCCGCT GCACGTCTCG ATATCCCCTG TATCGTCGTT ACGGCAGGGC CGATGATGAG TGGCCGTGGC GAGGCCGGCC GGAAATATTC GTTTGTCACC GATACCTTTG AGGCCATGGC CCGCTACAAG GCAGGCGTCA TCGACGAGAA GGAGCTAAAG GTCTGCGAGG ATAACGCCTG CCCCGGCATG GGGTCCTGTC AGGGGCTCTT TACCGCCAAC ACCATGGCCA TCCTTACCGA AACCCTCGGC ATGAGTCTCC CCCGCTGCGG CACGGCCCTG GCGGTGTCGG CCTTGAAGCG GCGCATTGCC TTTGCCTCCG GCGAGCGCAT CGTCGATCTC GTGCGCAACA ACGTGACCCC CCGCAGCATT CTCACCCGCG CGGCATTTGA AAACGCCATC CGCGTCGACC TGGCACTCGG CGGCTCATCG AACACCGTAC TCCATCTCCT TGCCATTGCC CATGAGGCCG GTGTGGAGCT GCCGCTGGAA ACCTTCGACA TCCTCGCCAA GGAAACGCCG CAACTCGCTT CGATGAACCC GGCCGGCGAG TATTTCATGG AAGACCTGGA TGCTGCCGGC GGGGTCGCCG GGGTGCTCAT GCAGCTGGGC GACAAGATCA AGGACAACCC GACGGTAATG GGTATGACTA CCCTGCAGCT GGCCGCCAGT ATTGCCAATG TGGATGAGGC GGTCATCCAC CCCCTGACCG ATCCGGTGAA GAAAGAGGGG GGCATTGCAA TCCTGTTCGG CAACCTTGCC CCCAAGGGGG CAGTGGTCAA GCAGTCGGGC GTATCAGAGG CCATGATGAA GTTTATCGGC ACGGCTCGTT GCTTCAACTC GGAAGAGGCG GCCATGGCGG CCCTGATGGA CGGCAACATC AAGGCGGGAG ATCTCGTTGT CATCCGTTAT GAAGGCCCCA AAGGCGGGCC CGGGATGCGG GAGATGCTTG CTCCGACCGC AGCCCTCATG GGACTCGGTC TTGGCGATTC AGTTGCACTT ATTACCGATG GCCGTTTTTC CGGCGGTACC CGCGGCCCCT GCATCGGTCA TATTTCACCG GAAGCTGCAG AAGGCGGCCC GATTGCCCTC GTGGAAGACG GAGACCGGAT CGAGCTGGAT ATTCCCGACC GCAGGCTGGA ACTGCTGGTT GACGAGCAGA CACTGTCCGA GCGACGCGCC CGCTGGCAAG CGCCTGAGCC GAAGATTAAA ACCGGCTGGC TGGCCCGGTA TGCCAAGGTG GTCACTTCGG CATACACCGG GGCCGTTATG TCGGCAGACT AA
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Protein sequence | MRSDMIKKGL ERTPHRALLK GTGVPQSEMD KPFIGVATSF TDLIPGHVGM RDLERFIEKG IHTGGGYAFF FGIPGVCDGI SMGHKGMHYS LPTRELIADM VESVAEAHRL DGLVLLTNCD KITPGMLMAA ARLDIPCIVV TAGPMMSGRG EAGRKYSFVT DTFEAMARYK AGVIDEKELK VCEDNACPGM GSCQGLFTAN TMAILTETLG MSLPRCGTAL AVSALKRRIA FASGERIVDL VRNNVTPRSI LTRAAFENAI RVDLALGGSS NTVLHLLAIA HEAGVELPLE TFDILAKETP QLASMNPAGE YFMEDLDAAG GVAGVLMQLG DKIKDNPTVM GMTTLQLAAS IANVDEAVIH PLTDPVKKEG GIAILFGNLA PKGAVVKQSG VSEAMMKFIG TARCFNSEEA AMAALMDGNI KAGDLVVIRY EGPKGGPGMR EMLAPTAALM GLGLGDSVAL ITDGRFSGGT RGPCIGHISP EAAEGGPIAL VEDGDRIELD IPDRRLELLV DEQTLSERRA RWQAPEPKIK TGWLARYAKV VTSAYTGAVM SAD
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