| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_3691 |
|---|
| Symbol | |
|---|
| ID | 5162961 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | - |
|---|
| Start bp | 4318354 |
|---|
| End bp | 4319376 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640551176 |
|---|
| Product | peptidoglycan-binding LysM |
|---|
| Protein accession | YP_001232417 |
|---|
| Protein GI | 148265711 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1652] Uncharacterized protein containing LysM domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000000027016 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAGGT TGATTTTTAT CGGATTGCTA CTCCTCATGT CGTTCATCTC TTCCCGCGAA
GTCTTTGCCC AGGAGGAACC GACCGTTTAC GTGATCCAGA AGGGCGATAC CCTCTGGGGC
CTGTCGGAAA AGTTCTTGCA GGATCCCTAT TACTGGCCGA ATCTCTGGGC ACGAAACCAG
TCCATAACAA ATCCCCACTT TATCTTTCCG GGGCAGCGAT TGAAGGTCTA TCCCGACAGG
ATCGAAGTGG AAACTCCCGC GGAGGTTCCG GCGCCTGCCG TGCATGGCGA AGAGCCGCAG
CCGGCTGAAA CGAAGAAAAT CGTTGAAGAG GTGGCCCCGG TAAAAACTTA TACGGTGAGC
GGCGGTGAAG GATTCCTCAT GGAAAACGGG CTGAAGCCTT CCGGCTATAT AGTCTCAACC
TATCAGGGGC GGCAGATGGT TGGTGAGGAC GACATCGTTT ACACCGACAT CGGCAAGGCG
AATGGCGTTG AGGTCGGCGA CAAGTTTTCC GTCTACAAGA AAATGGGCGC CGTCAGTCAT
CCGGTAACCA ATGTGATCCT GGGGTACAAG GTGATCCCCC TTGGTACGCT GCAGCTTTCA
GAGCTGGAGG AGAAAGTTTC CAAGGCGATT GTGACCAAGT CCTTTCAGGA GATCGGTGCA
GGGTCATTCC TGATGCCCTT CCGCCCACGG AAGCTTGAGG TGGCGCTGAA AGCCTCCGAC
AAGGAGCTTG TCGGCTACAT CGTCGAAACC AAAACCGGCA ACAAGGCCAT TGCGGCGGGT
GATGTTGCAT ACCTGGATCT TGGGAAGCAG CAGGGAGTTG AGGTCGGCAA CATGCTCTAT
ATCGTTCGGG ATGTGGCTCC CGATCAGACG TACGCCCTCG ATAAGATAGA AAAACTGCCG
GCGGAGCTAT TGGGCGCCCT GGTGATTGTC GAGACCAAGG AAAATACATC TACCGCCCTG
GTGGTAAAGA GCATCGACAC CATATACCGT GGTGATCGTG TCGAGTTGAA AAAAAACAGA
TAA
|
|---|
| Protein sequence | MRRLIFIGLL LLMSFISSRE VFAQEEPTVY VIQKGDTLWG LSEKFLQDPY YWPNLWARNQ
SITNPHFIFP GQRLKVYPDR IEVETPAEVP APAVHGEEPQ PAETKKIVEE VAPVKTYTVS
GGEGFLMENG LKPSGYIVST YQGRQMVGED DIVYTDIGKA NGVEVGDKFS VYKKMGAVSH
PVTNVILGYK VIPLGTLQLS ELEEKVSKAI VTKSFQEIGA GSFLMPFRPR KLEVALKASD
KELVGYIVET KTGNKAIAAG DVAYLDLGKQ QGVEVGNMLY IVRDVAPDQT YALDKIEKLP
AELLGALVIV ETKENTSTAL VVKSIDTIYR GDRVELKKNR
|
|---|
| |