Gene Gura_3573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGura_3573 
Symbol 
ID5164908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter uraniireducens Rf4 
KingdomBacteria 
Replicon accessionNC_009483 
Strand
Start bp4191419 
End bp4192627 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content52% 
IMG OID640551058 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionYP_001232300 
Protein GI148265594 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.855521 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAGAAG CAAAGCGAAC ACTGATTGAC GAACCGAATC TCGAACGTCT GCTGGGCCTT 
GAAAGCTCAA AGATCGGATT CTATTCGGAA GTCAAACAGA AAATCCAGGA ATTGGAGGCA
GCCAACCTTG GTTTGCGGAT CAAAACCAAT GAACTCCAGG CTGTCTTTGA TGCCATTAGT
GACAGCGTGG TCATCTACGA TCATAATGGG TGCATTCAGC ATCGAAATCA CGTATGTCCC
AGGCTGTTCC CCACGGAAAC CCTTGTCGGG CGGAGTTGCA GGGCGCTTTT TCACCCCGAA
AGCGACCATT CGCCCCAGCA ATGCCCGGTA GAACAGGCCT TGGCCGGCAA GAGCATGCAG
ATTTCCTTTA CAACGACGAA AGGGATCGGA GAAAGCCGTT ATTTCGACGT CACGGCGACC
CCGATTGAAG ATCCCAACGA ACAAACACGC GCGCTCGTAT TCATCCGGGA TGTTACCGAA
AAGCGGCTTA ACGAGCTCCA ACTTGTGCAG GCCGAGAAAA TGTCGAGTAT CGGCATGCTT
GCCGCTGGTG TGGCGCACGA GATCAACAAC CCGCTCACCT CCGTGGCCGG TTACGCCGAA
GCCTTGCTGC GAAGGTTCCG CGATGAGACT GGACTGGTGG AGGACAACCG GCTCAAAGAT
TTCAAGAAAT ATCTGGAGGT CATAATCCGC GAGTCTTACC GGTGCAAGGG GATTATTGAC
AGTCTGCTGA GTTTCAGTCG GAAATCGGAG GGTTCGGTCG GGTTTGTGGA TCTCAATAAG
ATCCTGAATG AGGTCCTGGA ACTGGTTCGG CATAAGGCCC GCAATGAAAA AATCGAGATA
CAGGAATCCA TGCAGCCGGA CCTGCCTATG ATTAAGGGGG ATGAGGCCGG TCTACGACAG
GTTTTCATGA ACCTGACTAT GAACGCTCTC CAGGCCATTG ACGGACCCGG GATGATAAAA
ATTGCCACCT TCGATCAGAA CGGAGTGGTG ACCGCCACTA TCTGCGATAG CGGGTGCGGC
ATCCCTTCAT CTCTCATGGA CCAGATTTGG GATCCGTTCT TTACCACGAA AGATGTGGGC
CAGGGGCTTG GCCTCGGCCT GGCTGTTACC TATAATATTA TTAAGAAGCA CGGCGGCGAG
ATCCACGTAG AAAGTAAGCA TGGAGAAGGA TCTAAATTCA CGGTGAGGCT TCCAGCATGT
CAACAGTAG
 
Protein sequence
MGEAKRTLID EPNLERLLGL ESSKIGFYSE VKQKIQELEA ANLGLRIKTN ELQAVFDAIS 
DSVVIYDHNG CIQHRNHVCP RLFPTETLVG RSCRALFHPE SDHSPQQCPV EQALAGKSMQ
ISFTTTKGIG ESRYFDVTAT PIEDPNEQTR ALVFIRDVTE KRLNELQLVQ AEKMSSIGML
AAGVAHEINN PLTSVAGYAE ALLRRFRDET GLVEDNRLKD FKKYLEVIIR ESYRCKGIID
SLLSFSRKSE GSVGFVDLNK ILNEVLELVR HKARNEKIEI QESMQPDLPM IKGDEAGLRQ
VFMNLTMNAL QAIDGPGMIK IATFDQNGVV TATICDSGCG IPSSLMDQIW DPFFTTKDVG
QGLGLGLAVT YNIIKKHGGE IHVESKHGEG SKFTVRLPAC QQ