Gene Gura_3565 details

Gene Information

• Locus tag: Gura_3565
• ID: 5163782
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter uraniireducens Rf4
• Kingdom: Bacteria
• Replicon accession: NC_009483
• Strand: -
• Start bp: 4180555
• End bp: 4182480
• Gene Length: 1926 bp
• Protein Length: 641 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 640551050
• Product: PAS/PAC sensor signal transduction histidine kinase
• Protein accession: YP_001232292
• Protein GI: 148265586
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG2202] FOG: PAS/PAC domain; [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system
• TIGRFAM ID: [TIGR00229] PAS domain S-box

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAAACAAT TCCGTGAAAA TCATGCTCAC CAACTCGAGT TGGAGACGAA GATCGAGGAA 
TTGCGCAAGT TCCAGGAGGA ACTGGAGGCA TCAAGGAACA AGTACGCCCT GCTTTACGAT 
TTTGCTCCGG TAGGTTATTT TACTTTCGAC CGTGAAGGAG TTATTCAGTC GGTCAACCTG 
ACCGGTGTGC GCCTTTTGGG TGTCGAACGT AATGATCTGG TGGGCAGGCG TTTCGGGGAA 
TTCGTAGCCG ATGATGAGTG GTTCGTATTC GTCAATTATC TCGCCACGGT CTTCTGCAGC 
CAAGGCAAGG AAACCTGCCG GCTGGGTCTT GCGCAGCGAG ACAAACAGCC GCTATTTGTG 
CGTATTGAGG CCATGGTCAC CGAATCGGGG GAAGAGTGTC TGGCCGTGCT GGTGGACATA 
ACCGAGAAGA AACTGGCCGA ACGGGCCCTG TCGGAGAGCG AATACAACCT GGCCAAGGCC 
CAGTCCATGA CCCACGTGGG CTCCTGGAGC TTCGACCCGA CCACCTCAGA GGTGAAGGCC 
TCCGACGAAC TGCTGCGCAT CATGCATCTC AGCCGCGACG AGGCCACCCA GGAGTCCTTT 
GCCAGCGTGG TACATTCCGA AGATCGTGAG AACGTCATGT GGCACCTGCG GCTGGGTGTC 
GAACATGGCA AGAGCTATGA GATCGAACAC CGCCTGCAGT TCGGCGAGGG CAGCTGCCGG 
TGGGTCTATT CCATCGTCGA GCCGTCGGTG AACAGTGCCG GCAAGGTGGT GCGGCTCTAC 
GGCACGACCC AGGATATCAC TGAGCGGAAA CAGGCCGAAG TCGAGCTGAG AAACAAAACT 
AACGAACTTC AGGCGATCTT CGACTCGATC AGCGACGGTA TCACGGTCTA CGACCATGAC 
GGCCTGATCC AGCATCATAA TCTCATTAGT CCGCAGTTAT ATCCCAAGGA GATACTTCCA 
GGGAAATCCT GCCGGGACAT CTTTCATCCG GAAACTCCAT CCATGCCGCA ACTTTGTCCC 
GTCGAAAGGG CTCTCCGGGG CGAGCGGGTG GAGACGTCTC AGGTTTCCGT ACGGGAAGGG 
CAAAAAACCC TGTATTTTGA CATAACCGCC ACCCCCATCA AAGACGCACT GGGAGAGAAA 
AACAGGGCAC TCGTCTTTTT CAGGGACATC TCGGAAAAAA GATTGCAGGA AATGCATCTG 
ATCCAGACCG AAAAAATGTC GGGCATCGGC GTGCTTGCCA CCGGAATCGC CCATGAAATC 
AACAACCCTC TCACCTCGAT AGCGGGCTAC GCAGAAGGGC TTTTGAGGCG TTTCCGTGAC 
GAACCGGCCT TGAAAGATGA TTGCCGGCTG GATGTCTTTC CGCACTACCT CGAAGTAATC 
GTCCGGGAGT CCTACCGCTG CAAGGGGATC ATCGACCACC TGCTCAGTTT CAGCAGGAAA 
TCGGACGGTT CTGCTGTCGA GGTGGATATG AACGTGGTCC TGCTGGAAAT TCTTGAGCTG 
TTGCGGCACC AGCAGATCTA TCGACAGATT GAAGTCGTTA CCCATCTGAG CAAAGACCTC 
CACTCTGTCC TGGGTGATCC GTCCGGATTG CGGCAGGTCT GCATGAACCT GCTGATAAAC 
GCCCACCAGT CGATCAAAGG GACCGGTCTG GTGGAATTGA CGACGGAGAA CCTGGATGAC 
ACGACGGTTT CCGTCAGGAT CCGTGATACC GGCTGCGGTA TCGCACAGGA TAAGATCGAC 
CGGATCTGGG ACCCCTTCTT TACAACCAAA GAGGTCGGCA AGGGGATCGG CCTCGGCCTG 
GCCCTGACGT ATAATATCAT CAAGCGTCAT GGCGGCGAGA TCCAGGTGGA AAGCCGGCCC 
GGAGAAGGAA CGCAGTTTAC GGTGCTTTTG CCGGCCAGTC ACAAGAAAGG AACTGTAAAC 
AAATAA 

 

Protein sequence

MKQFRENHAH QLELETKIEE LRKFQEELEA SRNKYALLYD FAPVGYFTFD REGVIQSVNL 
TGVRLLGVER NDLVGRRFGE FVADDEWFVF VNYLATVFCS QGKETCRLGL AQRDKQPLFV 
RIEAMVTESG EECLAVLVDI TEKKLAERAL SESEYNLAKA QSMTHVGSWS FDPTTSEVKA 
SDELLRIMHL SRDEATQESF ASVVHSEDRE NVMWHLRLGV EHGKSYEIEH RLQFGEGSCR 
WVYSIVEPSV NSAGKVVRLY GTTQDITERK QAEVELRNKT NELQAIFDSI SDGITVYDHD 
GLIQHHNLIS PQLYPKEILP GKSCRDIFHP ETPSMPQLCP VERALRGERV ETSQVSVREG 
QKTLYFDITA TPIKDALGEK NRALVFFRDI SEKRLQEMHL IQTEKMSGIG VLATGIAHEI 
NNPLTSIAGY AEGLLRRFRD EPALKDDCRL DVFPHYLEVI VRESYRCKGI IDHLLSFSRK 
SDGSAVEVDM NVVLLEILEL LRHQQIYRQI EVVTHLSKDL HSVLGDPSGL RQVCMNLLIN 
AHQSIKGTGL VELTTENLDD TTVSVRIRDT GCGIAQDKID RIWDPFFTTK EVGKGIGLGL 
ALTYNIIKRH GGEIQVESRP GEGTQFTVLL PASHKKGTVN K