| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_3546 |
|---|
| Symbol | |
|---|
| ID | 5163879 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | - |
|---|
| Start bp | 4162414 |
|---|
| End bp | 4163211 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640551032 |
|---|
| Product | regulatory protein, IclR |
|---|
| Protein accession | YP_001232274 |
|---|
| Protein GI | 148265568 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1414] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00000366663 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTACCA TTAGAACCAT AATGAAAAAA GAGAAGTCGA GTTATATCAT TCAGACCGTT
ATCCATGCCC TTGACCTCCT GGAGCAGTTC CATGGCGACG TGGTGGAGCT TGGCGTCACC
GAGCTCTCCA AACGCCTGGA TCTCCACAAG AACAATGTAT TCAGGTTGCT GGCTACCCTT
GAGTCGCATA ACTATATCGA GCAGAACCGG TCCACGGGCA GCTATCGCCT CGGTCTGAAA
AACCTGGAAC TGGGGCAGAC CATGATCAGG CAGATGGGGC TGTTGCGCCA GGCCAAGCCG
GTACTGGAAA CGCTGACGGC TCACTGCCAT GAAACCAGTT ATGTGGCGCT GCTACAGGAT
GCACATATCA TTTATCTGGA CGCGGTTGAA TCCGATTTGC CCGTCCGGGT GGTCCCACGG
GTCGGGGCGC GGCTCCCCGC ATACTGCACT GCTGCGGGCA AGGTGCATCT CGCCGCCATG
GCAGCCGAGG AGCTGGTGCA GCACCTTCCT GCCAGTGAAT TGGAGCGTTG CACCCCGCAC
ACCATTGTCA ACCGGGAGGA GTTGCAGAGG CAACTCCTGC AAGTGGTGGC GCAGGGATAC
GCCATTGACG ATGAAGAGCT TGACGTGGGT GTCAGGTGCA TCAGCGCGCC CATTCGCGAC
TATACCAAGA GAGTTGTCGG AGCGCTCAGC ATTTCCGGAC CGGTCATGCG TTTTACCGCA
GAGCGCATTG CTGGAGAGCT GGTTCCACTG GTCAGGACCG GCGCCGCTGA AGTTTCCGCC
CGCCTCGGCT ATAGCTGA
|
|---|
| Protein sequence | MTTIRTIMKK EKSSYIIQTV IHALDLLEQF HGDVVELGVT ELSKRLDLHK NNVFRLLATL
ESHNYIEQNR STGSYRLGLK NLELGQTMIR QMGLLRQAKP VLETLTAHCH ETSYVALLQD
AHIIYLDAVE SDLPVRVVPR VGARLPAYCT AAGKVHLAAM AAEELVQHLP ASELERCTPH
TIVNREELQR QLLQVVAQGY AIDDEELDVG VRCISAPIRD YTKRVVGALS ISGPVMRFTA
ERIAGELVPL VRTGAAEVSA RLGYS
|
|---|
| |