| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_3538 |
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| Symbol | |
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| ID | 5163770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter uraniireducens Rf4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009483 |
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| Strand | + |
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| Start bp | 4154422 |
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| End bp | 4156404 |
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| Gene Length | 1983 bp |
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| Protein Length | 660 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640551024 |
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| Product | Fis family GAF modulated sigma54 specific transcriptional regulator |
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| Protein accession | YP_001232266 |
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| Protein GI | 148265560 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATAAAT TCCCCACTAT CAGCAAGATC AAGATAAATC AGGCTCGCGC CGATTTTATC
AGCCGCGGGA CGCTCCCCAC CGGCCTCGTC TCGGACTCCA TAATGCGTTC CTGGCGACGT
TCGATCGACA ATGGTGTGGA CATGGAGCGG GAAAACAGCA ACATTCCGAC CATCACCAGC
AAGGAACTGG AAGGTCTCAC GGAAAAGAAT CGCAACCTCC TCGTCCAGTC CTTCCCCGTC
ATGGAGAACC TCTACGAGCA GATCCAGGAC ACTTCGAGCA TGGTGATCCT GGCAGATGCG
ACAGGGGTCG TGCTCCACTC CCTGGGGGAT ACGGATTTCG TGGACCGGGC CCGCAAAGTG
TCCTTGCAGC CCGGCGGCAT CTGGTCCGAG CAGTTTCGCG GCACGAATGC CATCGGCACT
GCCATTGTGG AGCAACTGCC GGTCCTTGTG CACAGTTCGG AACACTACGT AACGTCCAAC
GATTTTCTAA CCTGCTCGGC CGCCCCGATC TTCGACCCGT ACGGCAAGCT CCTCGGCGTC
CTCGACGTTT CCGGCGACTG CCGCGCCTAC CAGCAGCATA CGATGGCCCT CGTGAGGATT
TCCGTTCAGC AGATCGAAAA CCAGATGTTT TCCATCGGCT TCGATTCGGA CATCATCCTT
CAGTTCCATA GCCGCCCCGA ATTCATCGGC ACCATGTACG AAGCCATTGC GGTATTCGGA
CGTGATGGCC GTTTGCTGGC AGCGAACCGG AGCGCCCTCC TGCACCTGGG ATTGGACCGT
TACCGGGCCC AGACCGTAAC GTTCACCCAC CTGTTCGACC TGTCTCTCGA CTCGCTGCTG
GCCCATGCCG GGGCTACCCC CCAGCCGGTC CTGCAGCTGC CCCTCTACGG CGGGATGAAG
GTATTCGGCC GGGCAAGGGT TTCGCCGGCA CGATCTGCCA AGGTAATCAG TCACAAAGGA
TCGCCGGGAG CATCCACACC GGCACGAAAA CCGGGCCTGA GCGAAAGACG GCTTCTCGCC
CTGGATGCCC TGGAGTTCGG CGATACCAGG ATGCGGAGCG CCATCGACAA GGCGCGGAGG
GTAGCGGGAC ACGATATACC GGTGCTGATT GAAGGGGAAT CGGGAACCGG CAAAGAGCTT
TTCGCCAGGG CGATGCATCT GAGCGGCGGG CGGCGCAATG CGCCGTTCGT GGCGCTCAAC
TGCGCGGCGA TACCGGAAAA TTTGATCGAA TCGGAGTTGT TCGGCTATCA GGAAGGGGCG
TTCACCGGGG CAAAGCGGAA CGGGAGTATG GGCAAAATCC GGCAGGCGGA CGGGGGAACT
CTGTTTTTGG ACGAAATCGG CGACATGCCG TTGGCGCTGC AAGCGAGGTT ACTTCGGGTG
CTCCAGGAAC GCACCGTTAC CCCGCTGGGA GGCGCCGGTT CCCACCCCAT CGACATCTCG
GTGGTCTGTG CAACCAACCG GAAGCTTCGG GACGAAATCG CTGCAGGGCG TTTCCGGGAA
GATCTTTACT ACCGCCTCAA TGGACTGCTC ATCACCCTGC CGACCCTGCG GGAGCGCGAA
GACCTGCGTC CCCTGGCACA GTCCATTCTG AATGAGATTA CAGGATTGGG GCGGGTGATA
AGGTTGAGGG ACGACGTGCT CGACATTTTC GCGTCTCACC CCTGGCCGGG CAATGTCCGC
CAGATGCATA ACGTGCTCCG CACTGCGGTC GCCCTCCTCG GAGAAGACGA CGAGATCAGC
GTGGTCCACC TCTCCGACGA CTTTCTGGAA CAGTACCGGG AAGCCGCCCC CCTTCACATT
GAGAGTAAAA ACTACCTCCC GGCCACGACG GTGCAGGCCG GCACGGCAAG CCTGGACCAT
CTGGAGGCCC AGGCAATCCG CCAGGCGGTC AGGGAATGCA ACGGCAACAT ATCTGCCGCT
GCACGACGGC TCGGGATAAG CAGGAACACC CTCTACCGGA AAATGCGTTC CATCGGCCTG
TGA
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| Protein sequence | MHKFPTISKI KINQARADFI SRGTLPTGLV SDSIMRSWRR SIDNGVDMER ENSNIPTITS
KELEGLTEKN RNLLVQSFPV MENLYEQIQD TSSMVILADA TGVVLHSLGD TDFVDRARKV
SLQPGGIWSE QFRGTNAIGT AIVEQLPVLV HSSEHYVTSN DFLTCSAAPI FDPYGKLLGV
LDVSGDCRAY QQHTMALVRI SVQQIENQMF SIGFDSDIIL QFHSRPEFIG TMYEAIAVFG
RDGRLLAANR SALLHLGLDR YRAQTVTFTH LFDLSLDSLL AHAGATPQPV LQLPLYGGMK
VFGRARVSPA RSAKVISHKG SPGASTPARK PGLSERRLLA LDALEFGDTR MRSAIDKARR
VAGHDIPVLI EGESGTGKEL FARAMHLSGG RRNAPFVALN CAAIPENLIE SELFGYQEGA
FTGAKRNGSM GKIRQADGGT LFLDEIGDMP LALQARLLRV LQERTVTPLG GAGSHPIDIS
VVCATNRKLR DEIAAGRFRE DLYYRLNGLL ITLPTLRERE DLRPLAQSIL NEITGLGRVI
RLRDDVLDIF ASHPWPGNVR QMHNVLRTAV ALLGEDDEIS VVHLSDDFLE QYREAAPLHI
ESKNYLPATT VQAGTASLDH LEAQAIRQAV RECNGNISAA ARRLGISRNT LYRKMRSIGL
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