| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_3533 |
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| Symbol | |
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| ID | 5164170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter uraniireducens Rf4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009483 |
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| Strand | + |
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| Start bp | 4149032 |
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| End bp | 4150264 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640551019 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_001232261 |
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| Protein GI | 148265555 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGC CCTCTGATGC CCAGCAAAAC TGGAGCGCCG AGCGGGAAAA GATCATAGGG
CTAGGCGAAC GCTCACTGCG GAAAACCTAC TATCCCGAAC TTCAGCAAAA ACTCGATGAA
CTGGAGCGGT TCAGGGCACT GCTGGACCAG AGCAACGACT GCATTTTTCT CCTTGAGGCT
GCAACCCTCA CCTTTGTCGA TGTCAATGAG TCCGCCTGCC GTCAGCTGGG CTGTTCCCGC
GAGGAGTTCA TTTCCTTTCC TCTTGGAAAT TTTCTGCCGA AGGAAGCGAC GGCAAGGGTG
GAGAATCTGG TTTCTTCAGG ACCTGCCCAG GGGTGGGACC AGGACACGAT AACCACCCAA
ATGTGCAAAT GTTCGGGAGA AAAGCTTCCG GTCGAAATCA CCATCCGCCT GGTCACCTTC
AACAAGATTC TGTACGGCGT GGCAGTGGCC CGTGACATTA CCGAACGGAA ACGGGCGGAA
AAGGCGCTCC TGGAAAACTC CAGGATGCTG CGGGACATGG AACTCGCCCG ACAGATTCAG
CTCTCCCTTC TGCCGACCGC TCCGCCGAAA CTGCCCGGCG TCCTGCTCGC CGGATGCTGT
GTGCCCGCCA CCCATGTGGG AGGCGACTAT TACGACTACT ATGAGCGCGA AAACGGCGTA
GTGGATATGG TCATCGCAGA TGTTTCAGGC CACAGTATCG GTGCTGCCCT GATGACGGCA
GAAGCCAGAT CGGTTCTGCA CGCCGAGGTT CAGTCATTCA GCCATACCGG AGATATCCTC
GCATCGCTCA ATGAGATACT CTACAATGAT CTTAATCAGG CGGAGCTTTT CATAACCCTC
TTCTATGTCA AATATGACAC TCTCACCCAT ACTCTTACCT ATTCGAACGC CGGTCACGTC
TCCCCGTTGC TCACCCGCAA CTCCGGAGCA ACATGCCTGA AACTGGATGC CGAAGGGCTC
ATCCTGGGAG TCAAAAAGGG GGTGTCCTTC GAAGAAAAGC AGCTCCGGAT GGAGAAAGGT
GACCTCCTCT TCCTTTACAC AGACGGCGTC ACCGAATCCC GGAACAGCGC AGGAGAACTG
TTTGGCCTTG GCAGGCTGTG CGACCTCATA AATGCCCGGC ATGCGGAACC GCCCCAGGCG
ATTATCGACG CCGTGCTTGA GGATGTTTCG GCATTTACCG GCACATCCGC ACTGGAAGAC
GATGTGACCA TGGTCGCCAT GAAGGTGGTC TGA
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| Protein sequence | MKKPSDAQQN WSAEREKIIG LGERSLRKTY YPELQQKLDE LERFRALLDQ SNDCIFLLEA
ATLTFVDVNE SACRQLGCSR EEFISFPLGN FLPKEATARV ENLVSSGPAQ GWDQDTITTQ
MCKCSGEKLP VEITIRLVTF NKILYGVAVA RDITERKRAE KALLENSRML RDMELARQIQ
LSLLPTAPPK LPGVLLAGCC VPATHVGGDY YDYYERENGV VDMVIADVSG HSIGAALMTA
EARSVLHAEV QSFSHTGDIL ASLNEILYND LNQAELFITL FYVKYDTLTH TLTYSNAGHV
SPLLTRNSGA TCLKLDAEGL ILGVKKGVSF EEKQLRMEKG DLLFLYTDGV TESRNSAGEL
FGLGRLCDLI NARHAEPPQA IIDAVLEDVS AFTGTSALED DVTMVAMKVV
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