Gene Gura_3533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGura_3533 
Symbol 
ID5164170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter uraniireducens Rf4 
KingdomBacteria 
Replicon accessionNC_009483 
Strand
Start bp4149032 
End bp4150264 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content55% 
IMG OID640551019 
Productputative PAS/PAC sensor protein 
Protein accessionYP_001232261 
Protein GI148265555 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2208] Serine phosphatase RsbU, regulator of sigma subunit 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGC CCTCTGATGC CCAGCAAAAC TGGAGCGCCG AGCGGGAAAA GATCATAGGG 
CTAGGCGAAC GCTCACTGCG GAAAACCTAC TATCCCGAAC TTCAGCAAAA ACTCGATGAA
CTGGAGCGGT TCAGGGCACT GCTGGACCAG AGCAACGACT GCATTTTTCT CCTTGAGGCT
GCAACCCTCA CCTTTGTCGA TGTCAATGAG TCCGCCTGCC GTCAGCTGGG CTGTTCCCGC
GAGGAGTTCA TTTCCTTTCC TCTTGGAAAT TTTCTGCCGA AGGAAGCGAC GGCAAGGGTG
GAGAATCTGG TTTCTTCAGG ACCTGCCCAG GGGTGGGACC AGGACACGAT AACCACCCAA
ATGTGCAAAT GTTCGGGAGA AAAGCTTCCG GTCGAAATCA CCATCCGCCT GGTCACCTTC
AACAAGATTC TGTACGGCGT GGCAGTGGCC CGTGACATTA CCGAACGGAA ACGGGCGGAA
AAGGCGCTCC TGGAAAACTC CAGGATGCTG CGGGACATGG AACTCGCCCG ACAGATTCAG
CTCTCCCTTC TGCCGACCGC TCCGCCGAAA CTGCCCGGCG TCCTGCTCGC CGGATGCTGT
GTGCCCGCCA CCCATGTGGG AGGCGACTAT TACGACTACT ATGAGCGCGA AAACGGCGTA
GTGGATATGG TCATCGCAGA TGTTTCAGGC CACAGTATCG GTGCTGCCCT GATGACGGCA
GAAGCCAGAT CGGTTCTGCA CGCCGAGGTT CAGTCATTCA GCCATACCGG AGATATCCTC
GCATCGCTCA ATGAGATACT CTACAATGAT CTTAATCAGG CGGAGCTTTT CATAACCCTC
TTCTATGTCA AATATGACAC TCTCACCCAT ACTCTTACCT ATTCGAACGC CGGTCACGTC
TCCCCGTTGC TCACCCGCAA CTCCGGAGCA ACATGCCTGA AACTGGATGC CGAAGGGCTC
ATCCTGGGAG TCAAAAAGGG GGTGTCCTTC GAAGAAAAGC AGCTCCGGAT GGAGAAAGGT
GACCTCCTCT TCCTTTACAC AGACGGCGTC ACCGAATCCC GGAACAGCGC AGGAGAACTG
TTTGGCCTTG GCAGGCTGTG CGACCTCATA AATGCCCGGC ATGCGGAACC GCCCCAGGCG
ATTATCGACG CCGTGCTTGA GGATGTTTCG GCATTTACCG GCACATCCGC ACTGGAAGAC
GATGTGACCA TGGTCGCCAT GAAGGTGGTC TGA
 
Protein sequence
MKKPSDAQQN WSAEREKIIG LGERSLRKTY YPELQQKLDE LERFRALLDQ SNDCIFLLEA 
ATLTFVDVNE SACRQLGCSR EEFISFPLGN FLPKEATARV ENLVSSGPAQ GWDQDTITTQ
MCKCSGEKLP VEITIRLVTF NKILYGVAVA RDITERKRAE KALLENSRML RDMELARQIQ
LSLLPTAPPK LPGVLLAGCC VPATHVGGDY YDYYERENGV VDMVIADVSG HSIGAALMTA
EARSVLHAEV QSFSHTGDIL ASLNEILYND LNQAELFITL FYVKYDTLTH TLTYSNAGHV
SPLLTRNSGA TCLKLDAEGL ILGVKKGVSF EEKQLRMEKG DLLFLYTDGV TESRNSAGEL
FGLGRLCDLI NARHAEPPQA IIDAVLEDVS AFTGTSALED DVTMVAMKVV