| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_3486 |
|---|
| Symbol | |
|---|
| ID | 5164270 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | - |
|---|
| Start bp | 4101740 |
|---|
| End bp | 4102906 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640550972 |
|---|
| Product | succinyl-CoA synthetase, beta subunit |
|---|
| Protein accession | YP_001232214 |
|---|
| Protein GI | 148265508 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0045] Succinyl-CoA synthetase, beta subunit |
|---|
| TIGRFAM ID | [TIGR01016] succinyl-CoA synthetase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.333849 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACATTC ACGAGTACCA GGCAAAAGCA ATTTTGAGAG AGTTTGGTGT CCCAGTTCCC
GACGGGCACG TCTGTTACAA CGGCGCCAGC GCCCGCGAAT GGGCCAAGCG CCTGGGCGAA
GGTCCCTGGG TGGTCAAGGC CCAGATCCAC GCCGGCGGAC GCGGCAAGGG GGGCGGCGTC
AAACTGGCCC GTACTGCCGA CGAAGTGCGC AAAATAGCCC GAGACATGCT CGGCATGACC
CTGCGTACCC ACCAGACCGG CCCCGAAGGA AAGGTCGTCA CCCGGGTGCT GGTGGAAAAC
GGCTGCAACA TCGCCAATGA ACTGTACGTC AGCCTGGTGG TCGACCGTGG CAGCTCCAGG
GTAACCGTCA TGGCCTCCAC CGAAGGCGGC ATGGACATCG AAGAAGTTGC CGCCCAAACC
CCCGAGAAGA TCTTCACCGA AACAGTAGAT CCCCTGGTCG GCCTGACCGC ATTCCAATGC
CGCAAGATCG CCTTCAGCCT GGGACTGGGC GGAAAACTGG TGAACAAGGC CGTCTCAGTG
CTTCAAGGTC TCTACAAGAC CTTTATCGCC TGCGACTGCT CCATGCTGGA GATCAACCCC
CTGGTGATCA CCGCCGAGGA CGAGCTGCTC GCACTGGACG CCAAATTCGG ATTCGACGAC
AACGCCGTAT TCCGTCACCC CAAGCTCGGC GACATGCGAG ACTACGACGA AGAAGACCCC
AACGAAGTCG AAGCCTCACA GCATGACCTC TCCTACATCT CCCTCACCGG CAACATCGGT
TGCCTGGTCA ACGGCGCCGG CCTGGCCATG GCCACCATGG ACATCATCAA GCATTACGGC
GGCGATCCGG CCAACTTTCT CGACGTCGGG GGCGGAGCCA CCATCGAGCG CGTCACCGAA
GCCTTCAAGA TCATCCTCTC CGACAAAAAC GTGCAAGGGA TACTGGTCAA CATCTTCGGC
GGCATCATGA AATGCGACAT CATCGCCACC GGCGTCGTCG AAGCCGCCAA GCAGGTTTCC
CTCAACGTAC CGCTGGTGGT ACGATTGGAA GGAACCAACG TAGCCAGGGG CAAGGAGATC
CTGGCAGAAA GCGGTCTCAA CATCGTTGCC GCCGACGGCA TGGCCGACGC AGCCCAAAAA
ATCGTCCAGG CCGTGGTAGC CTGCTAA
|
|---|
| Protein sequence | MNIHEYQAKA ILREFGVPVP DGHVCYNGAS AREWAKRLGE GPWVVKAQIH AGGRGKGGGV
KLARTADEVR KIARDMLGMT LRTHQTGPEG KVVTRVLVEN GCNIANELYV SLVVDRGSSR
VTVMASTEGG MDIEEVAAQT PEKIFTETVD PLVGLTAFQC RKIAFSLGLG GKLVNKAVSV
LQGLYKTFIA CDCSMLEINP LVITAEDELL ALDAKFGFDD NAVFRHPKLG DMRDYDEEDP
NEVEASQHDL SYISLTGNIG CLVNGAGLAM ATMDIIKHYG GDPANFLDVG GGATIERVTE
AFKIILSDKN VQGILVNIFG GIMKCDIIAT GVVEAAKQVS LNVPLVVRLE GTNVARGKEI
LAESGLNIVA ADGMADAAQK IVQAVVAC
|
|---|
| |