| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_3477 |
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| Symbol | |
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| ID | 5163903 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter uraniireducens Rf4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009483 |
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| Strand | + |
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| Start bp | 4089816 |
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| End bp | 4090490 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640550964 |
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| Product | sigma-54 factor interaction domain-containing protein |
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| Protein accession | YP_001232206 |
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| Protein GI | 148265500 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.803912 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGCCCC CAGTGGTGGC CCGCTCGCCC CAGCCAGTCC TGGTGGCCGG TGAATCGGGG
ACGGGAAAAG AGCTGATTGC CCGGGCGATC CATCGCCTCA ACGGCTGCAG CGGAGAACTG
GTTTCGGTGA ATCTGGCAGG ACTGGACGAC ACCACGTTCT CCGACACCCT GTTCGGACAC
AAACGGGGAG CGTTCACAGG CGCAGAGCAG CTGCGCGAGG GGCTGGTCGT CAAGGCGGCC
GGTGGGCTTC TCTTTCTCGA CGAAATCGGC GACATGGGGG AGCTTTCCCA AATAAAGCTG
CTGCGCCTCA TCCAGGAGCG CGAATTCTAT CCGGTCGGAT CAGACACCCC TCGCCGATGC
GATGCACGGA TTGTCTGCGC CAGCAATAAA GACATCAAAA AAATGGTGGC AGCAGGCAAC
TTCCGTAACG ATCTCTACTA TCGCCTGAAT GTACACCATG TGTCCCTCCC CCCCCTCAGA
GAGCGGAAAG AGGATATCCC GCTTCTTTTG CAGCACTTCA TACGCCACTC GGCAGAAAAC
CTGGGATTGA AGCCCCCGAC CTATCCCAGG GAGCTGCCGG AACTGCTTTC GACTTACCAT
TTCCCTGGCA ACATGGAGTT GTCTGTTATC CGGACTGGTC AAGGGAACCA ACAACATCAC
GGTAACCGCC ACTGA
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| Protein sequence | MRPPVVARSP QPVLVAGESG TGKELIARAI HRLNGCSGEL VSVNLAGLDD TTFSDTLFGH
KRGAFTGAEQ LREGLVVKAA GGLLFLDEIG DMGELSQIKL LRLIQEREFY PVGSDTPRRC
DARIVCASNK DIKKMVAAGN FRNDLYYRLN VHHVSLPPLR ERKEDIPLLL QHFIRHSAEN
LGLKPPTYPR ELPELLSTYH FPGNMELSVI RTGQGNQQHH GNRH
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