| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_3422 |
|---|
| Symbol | |
|---|
| ID | 5166732 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | - |
|---|
| Start bp | 4021295 |
|---|
| End bp | 4022971 |
|---|
| Gene Length | 1677 bp |
|---|
| Protein Length | 558 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640550908 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001232151 |
|---|
| Protein GI | 148265445 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02231] conserved hypothetical protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000000443439 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAACC TGCGATACTT TCTGTTTCTG ATTCTCCTGC TGGCGCCGAC ACTCACCTTT
TCCGCTGATC TGAAACGGAT ACCGGCCGCC TCCCGCATTA CCGCCGTAAC TGTGTTTCCC
GACCGCGCCC TGACCTTGCG CACTGCTTCT CACAACCTCA AGCCCGGCAA TTATCTGATC
ACTTTCGACA GCCTTCCCAC GCTGATTCAG GACGATTCGG TACGGGTGGA AGGCAAGGGG
AGCGCCGGGG CGACAATCGT GGGACTGGAG GTCAAACGGG CCTTTCTTGA GCAGAGCGGC
GAGACGCGGG TGAAGGAGCT TGACGAGGAA ATCCGCGCTC TGGAGCAACG TTCCGGTGCG
CTGGACGCCA AAAAGGCCGG CCTGTCTTCA CAGGGAGCGT TTCTTCAATC GATCCGTGTC
GCCTGGGGAG ACCGCATCTC CAAGGAACTG GCAATCGGCC GCCCCACTGC GGCGGAACTG
CAGGACGCCG CCGGCTTTGT CGGCACGGGT GTCACCAGGA TTGAGGAACA GAACCTTGCG
ATCGAGACGG AAAAGAAGAG CATCCGGGAC AAGATCGATG CCCTGCGCCG CCAGCGGGAT
GAATCGACAG GTTCGCGCCG GAAAGAAACC AAAATCGTAG AGGTGATGCT GGATGTGGCC
CGTGAGGGAA ACCTGACGCT CGACCTTGCT ACGGTTATTC CACAGGCAGG CTGGGTCCCC
TCCTATGATG TCCGTCTGGC CGCAGACGCC AAAACTGCCG AGTTGACCTT CCGGGCTATG
GTGCGCCAGC AGACCGGCGA GGACTGGAAC AATGTGGACC TGACCCTTTC CACCGCCCGG
CCCGCTGCCG GCGGCGCTCC CCCGGAATTG TTCCCCTGGC GCATATCATT TTTACGCCCG
CAGCCGCTAT TGGAGGCGCA GAGGGTGTAT GAAGCTGCCC CAGCTGCACC GGTCGTGGGT
TTTATAGCGA AAAAGGGACG TCGGATATAC ACAGACAGTG GTCTGGTAGA AGATAAACGT
GCCGAAGAGG CGCCTGCTGA GTTTGAGACT GCCCAGATGA GTGAAGAGCA ATCCTCCGTT
GCCTTTCACA TTCCACGTCC GCTTGATGTC CCTTCCGACG GCACACAGCA CGGCAGCGTC
GTTGCCATCG AACAACTGCC GGTCAGCTTG GAGTTCATGG CGATTCCGAA ACTCTCGCCA
TATGTGTTTC TCAAGTCCGA GATCGTCAAC CGGGCCGCCT ACCCGCTCCT GCCGGGCAAG
GTCAACACCT TTACCGGCAA CACCTACACC GGCAGCTCGC AATTGAAGAA GGTCGCCGTC
GGAGAGAAGT TCGACCTCTT CTTCGGTACG GACGATCAGG TGACGGTCAA GCGCGAAGAG
CTGAAACAGC ACAAGGAAGC CGGAATGTTC GGCAACAGCC GCGTCAGCTA CCGTTACCGC
ATCGAACTGG TCAATTTCCG CAAGGAGCCG GTGACTGTCA TCCTTCGCGA CCAGTTGCCG
CTGGCGGGTG ACGAAGAGAT AAAGGTCTCC CTGGATGACC CGTCCATCAA GCCGGATGAG
TTCGGGACCG ACGGCAAGGT CACCTGGAAA ATTCCGCTCA AAGCGGGTGA GAAGAAGGAT
CTGACCTTCG GCATTCTGGT GGAGTACCCC AAGGATCGCG AGATAACCGG ATTATAG
|
|---|
| Protein sequence | MKNLRYFLFL ILLLAPTLTF SADLKRIPAA SRITAVTVFP DRALTLRTAS HNLKPGNYLI
TFDSLPTLIQ DDSVRVEGKG SAGATIVGLE VKRAFLEQSG ETRVKELDEE IRALEQRSGA
LDAKKAGLSS QGAFLQSIRV AWGDRISKEL AIGRPTAAEL QDAAGFVGTG VTRIEEQNLA
IETEKKSIRD KIDALRRQRD ESTGSRRKET KIVEVMLDVA REGNLTLDLA TVIPQAGWVP
SYDVRLAADA KTAELTFRAM VRQQTGEDWN NVDLTLSTAR PAAGGAPPEL FPWRISFLRP
QPLLEAQRVY EAAPAAPVVG FIAKKGRRIY TDSGLVEDKR AEEAPAEFET AQMSEEQSSV
AFHIPRPLDV PSDGTQHGSV VAIEQLPVSL EFMAIPKLSP YVFLKSEIVN RAAYPLLPGK
VNTFTGNTYT GSSQLKKVAV GEKFDLFFGT DDQVTVKREE LKQHKEAGMF GNSRVSYRYR
IELVNFRKEP VTVILRDQLP LAGDEEIKVS LDDPSIKPDE FGTDGKVTWK IPLKAGEKKD
LTFGILVEYP KDREITGL
|
|---|
| |