Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gura_3409 |
Symbol | |
ID | 5166879 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter uraniireducens Rf4 |
Kingdom | Bacteria |
Replicon accession | NC_009483 |
Strand | - |
Start bp | 4007734 |
End bp | 4008993 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640550895 |
Product | outer membrane efflux protein |
Protein accession | YP_001232138 |
Protein GI | 148265432 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000155286 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTGT TTTCGACCGT CGTGGCAACA TGGCTCCTTT TGGCTTCGCC ACTTCATGCC GCATCTCCCC TGACCCTTGA CGACGCCCTG GCCATAGCGC TCAAAAACCA CCCGCAGGTG ATCGAGGCCA GGGAGAATAT GAACGGCGCC GAGGCCCGGA CAGGCCAGGC ACTGGCCAAC TATTACCCCC AACTGAACAT TGCTGCAGAC TGGAGCAAAG GGCGCTCCTT CCTGACGCCG CTCGAAGCCG TCAAGCAAAC GGAAGTGCAG ACGGACGCCC TCTACCTGAG GCAGACCATC TATGATTTCG GCCGCACCTC AGGTGCTGTT GATGCTGCGC GCGGCAACAA CGCCGCTGCT GCCGAGACGC TTGCCGTAAC CCGTCAGGAC ATAGCTTACC GGGTCAGAGC GGCTTTCTAT CTCCTGCTGG CTGCCGAAAA ACAGGTCAAT GCCGTGAAAG AGACTGTCAG GGCAAGGGAA GTGGTTTATC GCCAGGCAGA AGAGTTCTTC AGGGAGGGGA TCAGGGCGAA GGTGGATGTG ACCAGGGCCG AGGCCAACAT GTTTGCAGCC AAGACCGCAC TGATCCGGGC GGAAAACAAC CTGGAGCTCG CACGGGTCGA GCTTGCCAAT GCCATGGGTG TTCCGTCATT GGAAACCAGC ACCGTTGTAG AGCCTTCTGC TGCGATTGAT ACGGAACCGG AACGGAACCG GGTGCAGCAG GAGGCCCTGA CCAACAGGGC CGAGCTGAAA CGGCTCAATG CGCTGAAAAG CTCGGCAGCC GCCGGCTTGA AAATTGCCAG GAGCGGTTAT CTCCCCATCC TCTCGGGGAC GGCGAGCGCC GGTTATGCGG ACAGGGAGTT TCCGCCGGGA GGGACGGTGT GGGGCGTCGG ATTGAACCTG ACCATACCGC TCTTTTCGGG CTTTTCCACG GTGCAGCAGG AAAAGGAGGC CGTGGCGCAG CTGCGGGCCG TCGACGCCCA GCAAAACAAC CAGAGGCTGC AGGTCGTGAG GGATGTGGAA TCGTCCTGGC TTGGCGTCAG GGAGGCGACC GCCCGCATAG CCTCGACGGA AAAGGAAGTG GCTGCCGCCA GGGAAAACCA GGCTCTTGCC ATGGGACGCT ACCAGGAAGG GGTCGGGAGT ATCATCGAGG TCACCGATGC CCAATCCCAG GCTCTTGATG CGGAAACAGC CCATATACAG GCAGTCTATG ATTATTACAC CGCGTCAGCC CGTTTGGACA GGGCGGTGGG AAAAGAGTGA
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Protein sequence | MKLFSTVVAT WLLLASPLHA ASPLTLDDAL AIALKNHPQV IEARENMNGA EARTGQALAN YYPQLNIAAD WSKGRSFLTP LEAVKQTEVQ TDALYLRQTI YDFGRTSGAV DAARGNNAAA AETLAVTRQD IAYRVRAAFY LLLAAEKQVN AVKETVRARE VVYRQAEEFF REGIRAKVDV TRAEANMFAA KTALIRAENN LELARVELAN AMGVPSLETS TVVEPSAAID TEPERNRVQQ EALTNRAELK RLNALKSSAA AGLKIARSGY LPILSGTASA GYADREFPPG GTVWGVGLNL TIPLFSGFST VQQEKEAVAQ LRAVDAQQNN QRLQVVRDVE SSWLGVREAT ARIASTEKEV AAARENQALA MGRYQEGVGS IIEVTDAQSQ ALDAETAHIQ AVYDYYTASA RLDRAVGKE
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