Gene Gura_3409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGura_3409 
Symbol 
ID5166879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter uraniireducens Rf4 
KingdomBacteria 
Replicon accessionNC_009483 
Strand
Start bp4007734 
End bp4008993 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content60% 
IMG OID640550895 
Productouter membrane efflux protein 
Protein accessionYP_001232138 
Protein GI148265432 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID[TIGR01844] type I secretion outer membrane protein, TolC family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000155286 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTGT TTTCGACCGT CGTGGCAACA TGGCTCCTTT TGGCTTCGCC ACTTCATGCC 
GCATCTCCCC TGACCCTTGA CGACGCCCTG GCCATAGCGC TCAAAAACCA CCCGCAGGTG
ATCGAGGCCA GGGAGAATAT GAACGGCGCC GAGGCCCGGA CAGGCCAGGC ACTGGCCAAC
TATTACCCCC AACTGAACAT TGCTGCAGAC TGGAGCAAAG GGCGCTCCTT CCTGACGCCG
CTCGAAGCCG TCAAGCAAAC GGAAGTGCAG ACGGACGCCC TCTACCTGAG GCAGACCATC
TATGATTTCG GCCGCACCTC AGGTGCTGTT GATGCTGCGC GCGGCAACAA CGCCGCTGCT
GCCGAGACGC TTGCCGTAAC CCGTCAGGAC ATAGCTTACC GGGTCAGAGC GGCTTTCTAT
CTCCTGCTGG CTGCCGAAAA ACAGGTCAAT GCCGTGAAAG AGACTGTCAG GGCAAGGGAA
GTGGTTTATC GCCAGGCAGA AGAGTTCTTC AGGGAGGGGA TCAGGGCGAA GGTGGATGTG
ACCAGGGCCG AGGCCAACAT GTTTGCAGCC AAGACCGCAC TGATCCGGGC GGAAAACAAC
CTGGAGCTCG CACGGGTCGA GCTTGCCAAT GCCATGGGTG TTCCGTCATT GGAAACCAGC
ACCGTTGTAG AGCCTTCTGC TGCGATTGAT ACGGAACCGG AACGGAACCG GGTGCAGCAG
GAGGCCCTGA CCAACAGGGC CGAGCTGAAA CGGCTCAATG CGCTGAAAAG CTCGGCAGCC
GCCGGCTTGA AAATTGCCAG GAGCGGTTAT CTCCCCATCC TCTCGGGGAC GGCGAGCGCC
GGTTATGCGG ACAGGGAGTT TCCGCCGGGA GGGACGGTGT GGGGCGTCGG ATTGAACCTG
ACCATACCGC TCTTTTCGGG CTTTTCCACG GTGCAGCAGG AAAAGGAGGC CGTGGCGCAG
CTGCGGGCCG TCGACGCCCA GCAAAACAAC CAGAGGCTGC AGGTCGTGAG GGATGTGGAA
TCGTCCTGGC TTGGCGTCAG GGAGGCGACC GCCCGCATAG CCTCGACGGA AAAGGAAGTG
GCTGCCGCCA GGGAAAACCA GGCTCTTGCC ATGGGACGCT ACCAGGAAGG GGTCGGGAGT
ATCATCGAGG TCACCGATGC CCAATCCCAG GCTCTTGATG CGGAAACAGC CCATATACAG
GCAGTCTATG ATTATTACAC CGCGTCAGCC CGTTTGGACA GGGCGGTGGG AAAAGAGTGA
 
Protein sequence
MKLFSTVVAT WLLLASPLHA ASPLTLDDAL AIALKNHPQV IEARENMNGA EARTGQALAN 
YYPQLNIAAD WSKGRSFLTP LEAVKQTEVQ TDALYLRQTI YDFGRTSGAV DAARGNNAAA
AETLAVTRQD IAYRVRAAFY LLLAAEKQVN AVKETVRARE VVYRQAEEFF REGIRAKVDV
TRAEANMFAA KTALIRAENN LELARVELAN AMGVPSLETS TVVEPSAAID TEPERNRVQQ
EALTNRAELK RLNALKSSAA AGLKIARSGY LPILSGTASA GYADREFPPG GTVWGVGLNL
TIPLFSGFST VQQEKEAVAQ LRAVDAQQNN QRLQVVRDVE SSWLGVREAT ARIASTEKEV
AAARENQALA MGRYQEGVGS IIEVTDAQSQ ALDAETAHIQ AVYDYYTASA RLDRAVGKE