| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_3388 |
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| Symbol | |
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| ID | 5166783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter uraniireducens Rf4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009483 |
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| Strand | - |
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| Start bp | 3978096 |
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| End bp | 3981128 |
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| Gene Length | 3033 bp |
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| Protein Length | 1010 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640550873 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_001232117 |
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| Protein GI | 148265411 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01553] formate dehydrogenase, alpha subunit, proteobacterial-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTTTTT CACGAAGACA ATTTTTGCAG GGGGGAGTGC TGGCTGCTGC CGGCGTGGCT
CTTTCCGGCA AGCCGGGCGA GGCGAGCGTC GATTCCCCGG AAATGCGCAC CAAGGGTTTG
AAGGCTTCGA CCACAATCTG TCCATTCTGC GCGGTTGGAT GCGGTCTTAT CGTTCACAGC
AAAAACGGCA AAATCATCAA CATCGAAGGT GATCCGCAGC ATCCCATCAA CCAGGGGGCG
CTCTGCTCCA AGGGGAGTTC CCTGTTCCAG GTGGCCAACA ACGAACGGCG CCTGCAAAAG
GTCATGTACC GCGCCCCCGG ATCCGACAAG TGGGAAGAGA AGTCCTGGGA CTGGGCCCTC
GACCGGATCG CGGCGAAGAT GAAGGAGACC CGCGACCGGA CCTTCAAGGC AAAAGAGATC
AACAAGAAGG ACAACAAGGA ATACGTGGTC AACCGCAACG AGGGGATGGC TTTCCTCGGC
GGCGCCGGAC TCGACAACGA GGAGTGCTAC CTCTGGTCGA AATTTGCCCG CGCCATGGGG
GTTGCCAACC TGGAACATCA GGCCCGAATA TGACACTCAG CTACAGTCGC CGGTCTGGCG
GCTTCGTTTG GCCGTGGTGC CATGACAAAC CATTGGATAG ACCTGAAGAA CAGTGATTGC
ATCCTCGCCA TCGGCTGTAA CCCGGCCGAG AACCACCCCA TTTCCTTCAA ATGGATTGAA
ACAGCCATGG ATAGCGGCGG CAAGCTGATA GCCGTCGATC CCCGTTTTAC CCGGACAGCA
AGTAAGGCGG ACATCTATGC CCAGATCCGT CCCGGCACCG ACATCGCCTT CCTCGGCGGG
ATGATCAACT ACGCATTGCA GAACAACCTG ACCCATGCGG AGTACGTGCG GGAGTACACC
AATGCCGCGT TCATCGTCTC GGAAACGTAT GACTTCGAGG ACGGCCTCTT CTGCGCCTTC
GACGACCAGG AAAAGTCCTA CGACCTGAAG TCCTGGGCTT ATCAGACCGA CGGGGCGGGG
AACCCGAAAC AGGACAAGAC CCTCCAGAAT CCGCGCTGCG TCTATCAGCT GATGAAGAAG
CACTTCTCCC GCTATGACGT GGACAAGGTC TGCGCCATCA CCGGGACCAG GAAGGAAGAC
TACCTTGCCG TGGCCAGGGC GTTCTGCGCC ACCGGCCGTC CCGACAAGGC CGGCACCATC
ATGTACGCCA TGGGGATCAC CCAGTCCACC CACGGCACCC AGAATGTCCG CGCCGTGGCC
ATGCTCCAGA TGCTCCTGGG GAACATCGGC ATTGCCGGCG GCGGGGTAAA TGCGCTGCGT
GGTGAGTCCA ACGTCCAGGG CTCTTCCGAC TACGGCCTCC TCTTCCACCT CCTCCCCGGC
TACCTGAAGT CGCCGGAGTT CGACAACACC GATTTGAAGG CGTACCTGGA GAAGTGGACG
CCGAAATCCA AGGACAAGAA GAGCGCCAAC TGGATGGGCA ACACCCCGAA ATACACGGTG
AGCCTCCTCA AGGCCTGGTA CGGCGACAAC GCCAAAAAGG AAAACGATTT CTGCTACGAC
TACCTCCCCA AGCGGAGCGG CAACTACTCC TTCATGAAGC TGATGGAAAA GATGGGGCAG
GGTGGGCTGG ACGGTCTCGT CTGCATGGGG CAGAACCCGG CAGTCGGCGG CCCTGATTCC
ACCAAGACCC GAGAAGCGCT AGGCAAGCTC AAGTGGCTCG TCACCGTCGA CCTGTGGGAG
ACGGAAACCT CCATCTTCTG GAAGCGCCCC GGCGTGAAGC CTGCGGATAT CCAGACCGAG
GTCTTCATGC TCCCGGCCGC ATCAAGCGTG GAGAAGGAAG GCTCGATCTC CAACTCCGGC
CGCTGGGCCC AGTGGCGTTA CAAGGCTGTG GAGCCGGTCG GGGAGGCCAG GAGCGACCTC
TGGATCATCG ACCAGTTCTA CAAGCGGGTC AAAACCCTCT ATACAAAGGG GGGGGCCTTT
CCCGAGCCGC TCACCAGGCT TTCCTGGAAC TACGGCAGCG GCCACGAGCC TGAAGTGCAG
CTGGTGGCGA AGGAGATCAA CGGCTACTTC ACCAGGGACA TGAGCATCAA GGACAAGGAC
AAGACCCTTG AGTTCAAGGC GGGCGACCAG GTCCCCATGT TCAAATACCT ACAGGACGAC
GGTTCCACCG TCTCCGGCTG CTGGATCTAC TGCGGCTCCT TCACCAAGGA CGGCAACCAG
ATGGCCCGCC GCGACCTGAC CGACGCTCCA AACAATCTGG GGCTCTTTCC CAAGTGGGCG
TGGTGCTGGC CGGTCAACCG CCGCATCATC TACAACCGCG CCTCGGTCAA CCCCGAAGGT
ATCCCGTTTA ACCCGAAACG GCCGGTCATC GCCTGGGACC CGCTGGAGAA GAAGTGGAAG
GGTGATGTCC CGGACGGCCC CTGGCCGCCC ATGAAGGACG ACAAGGAAGG AAAGTATCCC
TTCATCATGG TGCCGGAGGG GCTCGGACGG CTCTACGCCC TGGACATGAA GGACGGCCCG
TTCCCCGAGC ATTACGAGCC GGTGGAAAGC CCGGCAAAGA ACCAGCTTTC CAGCGTTCAG
AACAACCCGG CGGTCAAGCT GCCGAAAAAC GTTTCCAGCG ACACAGCCAA GTTTCCCTAC
ATAGGCACCA CCTACCGGAT GACGGAGCAC TGGCAGGCAG GGGCCATGAC GCGGAACCTT
CCCTGGCTGG TGGAACTGGT TCCCGACATG TTCATCGAGA TCAGCGAGAC GCTGGCCAGG
AAGAAGGGGC TTGCAAACGG CGACAAGGTG CGCATTACCA CCGAGCGCGG CTCCATCGAG
GCCGTGACCC TCGTCACTGC CAGGCTCAAG CCGTTCAATG TGGAAGGCAA GATGATCGAA
CAGGTGGGAC TGCCGTGGCA TTTCGGCTAC GCCGGTCTTG CCAAGGGAGA CAGCGGCAAC
GTCCTGACGC CATCGGTCGG CTGCGCAAAC ACGAGCATCC CCGAATTCAA GGCATTCCTC
TGCAATATCG AGAAAGGGGG TAAGCGCTCA TGA
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| Protein sequence | MGFSRRQFLQ GGVLAAAGVA LSGKPGEASV DSPEMRTKGL KASTTICPFC AVGCGLIVHS
KNGKIINIEG DPQHPINQGA LCSKGSSLFQ VANNERRLQK VMYRAPGSDK WEEKSWDWAL
DRIAAKMKET RDRTFKAKEI NKKDNKEYVV NRNEGMAFLG GAGLDNEECY LWSKFARAMG
VANLEHQARI UHSATVAGLA ASFGRGAMTN HWIDLKNSDC ILAIGCNPAE NHPISFKWIE
TAMDSGGKLI AVDPRFTRTA SKADIYAQIR PGTDIAFLGG MINYALQNNL THAEYVREYT
NAAFIVSETY DFEDGLFCAF DDQEKSYDLK SWAYQTDGAG NPKQDKTLQN PRCVYQLMKK
HFSRYDVDKV CAITGTRKED YLAVARAFCA TGRPDKAGTI MYAMGITQST HGTQNVRAVA
MLQMLLGNIG IAGGGVNALR GESNVQGSSD YGLLFHLLPG YLKSPEFDNT DLKAYLEKWT
PKSKDKKSAN WMGNTPKYTV SLLKAWYGDN AKKENDFCYD YLPKRSGNYS FMKLMEKMGQ
GGLDGLVCMG QNPAVGGPDS TKTREALGKL KWLVTVDLWE TETSIFWKRP GVKPADIQTE
VFMLPAASSV EKEGSISNSG RWAQWRYKAV EPVGEARSDL WIIDQFYKRV KTLYTKGGAF
PEPLTRLSWN YGSGHEPEVQ LVAKEINGYF TRDMSIKDKD KTLEFKAGDQ VPMFKYLQDD
GSTVSGCWIY CGSFTKDGNQ MARRDLTDAP NNLGLFPKWA WCWPVNRRII YNRASVNPEG
IPFNPKRPVI AWDPLEKKWK GDVPDGPWPP MKDDKEGKYP FIMVPEGLGR LYALDMKDGP
FPEHYEPVES PAKNQLSSVQ NNPAVKLPKN VSSDTAKFPY IGTTYRMTEH WQAGAMTRNL
PWLVELVPDM FIEISETLAR KKGLANGDKV RITTERGSIE AVTLVTARLK PFNVEGKMIE
QVGLPWHFGY AGLAKGDSGN VLTPSVGCAN TSIPEFKAFL CNIEKGGKRS
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