Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gura_3377 |
Symbol | |
ID | 5163732 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter uraniireducens Rf4 |
Kingdom | Bacteria |
Replicon accession | NC_009483 |
Strand | - |
Start bp | 3966918 |
End bp | 3969245 |
Gene Length | 2328 bp |
Protein Length | 775 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640550863 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_001232107 |
Protein GI | 148265401 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCACAC CCGACCTTGA TAAGGAAAAG GCACGCCAGG AACAGGAATT GAGAATCCAG CGGCAAATAG CCTTTGCCTC CGGACTTTTC CAGGGCGATG TCACGGTACG CACCCTTCTG GAGTCGCTCG CCGAAGGGAT TGTCATCATC GACAACTCCG GGACCGTTCT GCTGGTCAAT GCCCGCGCCG AGCAGATGTT CGGTTATCCG ACGAAGGAGC TCATCGGGAA GCCCCACTCC ATTCTCATTC CTGAACGCTT CCGTAAAGCC CATGAAGAGC ATGAGGCGCA TTTCTTCGCA GAGCCCAGGA TCAGGCCGAT GGGGCAGCTC CTTGACCTTG CCGGCCGCCG CCGGGACGGA AGCGAGTTCC CTGTGGAAAT CAGCCTGAGC TTTATCGAAA CCATAAACGG CGTTCTCGTT CTGGCCTTCG TCAGCGACAT GACCTTCCGC AAGCAGTACG AGTCGCGTCT TCAGGATAGC GAGGAGCTGT TTCGCATACA GGTGGAATGC GTGAAGGACT ACGCTATTTT CATGCTCGAC GCACAGGGAA ATGTCCTGAA TTGGAATGTG GGTGCCGAAC GCTTGAAGGG TTATGGGGAA AAAGAGATTA TCGGCAGACA TTTTTCCTGT TTTTATCCCG AAGAGGAGCG CGATGCGGGC AAGCCCGCAG AAGAACTGAA AAAAGCAGCA GACGAGGGGC GGGTTGAAGG CGAGGGGTGG CTGATCCGCA AGGATGGGAG CCGGTTCTGG GCCGATGTGA TAATTACCGC GCTGCGCGAT GAAAACGGGA ACCTGCGGGG CTTCTCAAAA GTGACGCGCG ACATCAGCGG GCGAAAAATG GTGGAAGATG CCCTGCGCTT CAGCGAAGCA CGCTATCGGG CCTTGTTTCG AGACAACCCG ACCATGATCG TTACCCTCGA TACCGAGTGG ACGATGCTCT CGGTCAATCC ATCTTGCGCA AGTCAACTGG GCTACACGAT AGACGAACTG GAAGGTCAGT CGGTGCTGAA GCTGTTCCAT GAAGACGATC GCCCTGCCGT GGCCGAGCAG CTGCATGCGT GCTTGCGGAA CCCCGATCAG GTGCATCGCT GGCAGTTTCG CAAGATCCGC AAAGACGGGG AGGTGCTGTG GGTGGAGGAA ATAGCGCAGG CGGTGCACGA CCTGAACGGC ACGCTCAACG TCCTGGTCGT GTGTCAGGAT GTCACCGAGC GCAAGCGGGT GGAGGAAGCG CTCATCAGAT CGGAGCAGAA GTTCTCCCTG GCCTTCCAGG CCACTCCGAC CGTCCTCGTC ATCGCCTCCC TTGAAGACGG GAGGTACATG GAGGTCAACG AGGCATTCGA ACGGGTAATG GGCTATCGGC GCGACGAGGT GATCGGCCGT TCTTCGCTGG AGCTCCACAT CTGGCAGAAG CCGGAAGACC GGGCCATGGT GCTCCGGATG CTTGCGGCAG GAAAGAAGGT GCGCGAACTG GAGATCGGCT TCAGGAGCAA ACCGGGCACC TTTATCGTCG GCCTCTATTC GGCGGAAATC ATCGAGATCG GCACGCAACG ATGTCTCCTG AGCCTGGTGA ACGATATCAC CGCCCGAAAA CGGGCCGAGG AGGAGGTCGA AATCCTGAAC ACCAATTTGG CAGCGCGGGC TTTCGAGCTG GAAACGGCCA ACAGGGAACT GGAGGCTTTC AGCTATTCCG TCTCCCACGA CCTGCGCAAG CCTCTGACGG TCATCAACGG CTACTGCCAG ATCATTCAGG AGTCGTGCGG CAACAACCTG AACGCCCAGT GCCAGGGCTA TCTGCAGGAG ATCAATGACG GGACCCTGAG CATGAACCAG CTCATCGATG CCCTGCTCAA TTTCTCCCGC CTGGCCCATA TCGAGCCGCG CCGGGAAACG ATTGATCTCT CCGCCATGGC ACATGAGGTG GCTGAGGAGC TGAAACTGGT CGAGCCGGGG CGCCGGGTCA CGTTCCTGAT CACCGACGGC GTTAGTGCCG ACGGGGATGC GGGTTTGCTC CGGGTGGTCC TGGATAACCT CCTCGGCAAC GCCTGGAAAT ACACCGGCAC GCGGGATGAA GGGATCATCG AGTTCGGTAC GACAAAAGTC GATGGAAAGC CTGCCTGTTT CGTCCGCGAC AACGGAGCCG GATTCGACAT GGCGGATGCG GACAAGCTCT TTGCCCCTTT CCAGCGGCTT CCCGGCACCG ATGAATTCAG GGGACACGGC ATCGGTCTCG CCACGGTGGA GCGGATCATC CAACGCCACG GCGGCCGGGT GTGGGCCAAG GGGGAGCCGG GCAAGGGGGC GACCTTTTAC TTCACCCTTT CAACATGA
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Protein sequence | MSTPDLDKEK ARQEQELRIQ RQIAFASGLF QGDVTVRTLL ESLAEGIVII DNSGTVLLVN ARAEQMFGYP TKELIGKPHS ILIPERFRKA HEEHEAHFFA EPRIRPMGQL LDLAGRRRDG SEFPVEISLS FIETINGVLV LAFVSDMTFR KQYESRLQDS EELFRIQVEC VKDYAIFMLD AQGNVLNWNV GAERLKGYGE KEIIGRHFSC FYPEEERDAG KPAEELKKAA DEGRVEGEGW LIRKDGSRFW ADVIITALRD ENGNLRGFSK VTRDISGRKM VEDALRFSEA RYRALFRDNP TMIVTLDTEW TMLSVNPSCA SQLGYTIDEL EGQSVLKLFH EDDRPAVAEQ LHACLRNPDQ VHRWQFRKIR KDGEVLWVEE IAQAVHDLNG TLNVLVVCQD VTERKRVEEA LIRSEQKFSL AFQATPTVLV IASLEDGRYM EVNEAFERVM GYRRDEVIGR SSLELHIWQK PEDRAMVLRM LAAGKKVREL EIGFRSKPGT FIVGLYSAEI IEIGTQRCLL SLVNDITARK RAEEEVEILN TNLAARAFEL ETANRELEAF SYSVSHDLRK PLTVINGYCQ IIQESCGNNL NAQCQGYLQE INDGTLSMNQ LIDALLNFSR LAHIEPRRET IDLSAMAHEV AEELKLVEPG RRVTFLITDG VSADGDAGLL RVVLDNLLGN AWKYTGTRDE GIIEFGTTKV DGKPACFVRD NGAGFDMADA DKLFAPFQRL PGTDEFRGHG IGLATVERII QRHGGRVWAK GEPGKGATFY FTLST
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