| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_3377 |
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| Symbol | |
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| ID | 5163732 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter uraniireducens Rf4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009483 |
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| Strand | - |
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| Start bp | 3966918 |
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| End bp | 3969245 |
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| Gene Length | 2328 bp |
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| Protein Length | 775 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640550863 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_001232107 |
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| Protein GI | 148265401 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCACAC CCGACCTTGA TAAGGAAAAG GCACGCCAGG AACAGGAATT GAGAATCCAG
CGGCAAATAG CCTTTGCCTC CGGACTTTTC CAGGGCGATG TCACGGTACG CACCCTTCTG
GAGTCGCTCG CCGAAGGGAT TGTCATCATC GACAACTCCG GGACCGTTCT GCTGGTCAAT
GCCCGCGCCG AGCAGATGTT CGGTTATCCG ACGAAGGAGC TCATCGGGAA GCCCCACTCC
ATTCTCATTC CTGAACGCTT CCGTAAAGCC CATGAAGAGC ATGAGGCGCA TTTCTTCGCA
GAGCCCAGGA TCAGGCCGAT GGGGCAGCTC CTTGACCTTG CCGGCCGCCG CCGGGACGGA
AGCGAGTTCC CTGTGGAAAT CAGCCTGAGC TTTATCGAAA CCATAAACGG CGTTCTCGTT
CTGGCCTTCG TCAGCGACAT GACCTTCCGC AAGCAGTACG AGTCGCGTCT TCAGGATAGC
GAGGAGCTGT TTCGCATACA GGTGGAATGC GTGAAGGACT ACGCTATTTT CATGCTCGAC
GCACAGGGAA ATGTCCTGAA TTGGAATGTG GGTGCCGAAC GCTTGAAGGG TTATGGGGAA
AAAGAGATTA TCGGCAGACA TTTTTCCTGT TTTTATCCCG AAGAGGAGCG CGATGCGGGC
AAGCCCGCAG AAGAACTGAA AAAAGCAGCA GACGAGGGGC GGGTTGAAGG CGAGGGGTGG
CTGATCCGCA AGGATGGGAG CCGGTTCTGG GCCGATGTGA TAATTACCGC GCTGCGCGAT
GAAAACGGGA ACCTGCGGGG CTTCTCAAAA GTGACGCGCG ACATCAGCGG GCGAAAAATG
GTGGAAGATG CCCTGCGCTT CAGCGAAGCA CGCTATCGGG CCTTGTTTCG AGACAACCCG
ACCATGATCG TTACCCTCGA TACCGAGTGG ACGATGCTCT CGGTCAATCC ATCTTGCGCA
AGTCAACTGG GCTACACGAT AGACGAACTG GAAGGTCAGT CGGTGCTGAA GCTGTTCCAT
GAAGACGATC GCCCTGCCGT GGCCGAGCAG CTGCATGCGT GCTTGCGGAA CCCCGATCAG
GTGCATCGCT GGCAGTTTCG CAAGATCCGC AAAGACGGGG AGGTGCTGTG GGTGGAGGAA
ATAGCGCAGG CGGTGCACGA CCTGAACGGC ACGCTCAACG TCCTGGTCGT GTGTCAGGAT
GTCACCGAGC GCAAGCGGGT GGAGGAAGCG CTCATCAGAT CGGAGCAGAA GTTCTCCCTG
GCCTTCCAGG CCACTCCGAC CGTCCTCGTC ATCGCCTCCC TTGAAGACGG GAGGTACATG
GAGGTCAACG AGGCATTCGA ACGGGTAATG GGCTATCGGC GCGACGAGGT GATCGGCCGT
TCTTCGCTGG AGCTCCACAT CTGGCAGAAG CCGGAAGACC GGGCCATGGT GCTCCGGATG
CTTGCGGCAG GAAAGAAGGT GCGCGAACTG GAGATCGGCT TCAGGAGCAA ACCGGGCACC
TTTATCGTCG GCCTCTATTC GGCGGAAATC ATCGAGATCG GCACGCAACG ATGTCTCCTG
AGCCTGGTGA ACGATATCAC CGCCCGAAAA CGGGCCGAGG AGGAGGTCGA AATCCTGAAC
ACCAATTTGG CAGCGCGGGC TTTCGAGCTG GAAACGGCCA ACAGGGAACT GGAGGCTTTC
AGCTATTCCG TCTCCCACGA CCTGCGCAAG CCTCTGACGG TCATCAACGG CTACTGCCAG
ATCATTCAGG AGTCGTGCGG CAACAACCTG AACGCCCAGT GCCAGGGCTA TCTGCAGGAG
ATCAATGACG GGACCCTGAG CATGAACCAG CTCATCGATG CCCTGCTCAA TTTCTCCCGC
CTGGCCCATA TCGAGCCGCG CCGGGAAACG ATTGATCTCT CCGCCATGGC ACATGAGGTG
GCTGAGGAGC TGAAACTGGT CGAGCCGGGG CGCCGGGTCA CGTTCCTGAT CACCGACGGC
GTTAGTGCCG ACGGGGATGC GGGTTTGCTC CGGGTGGTCC TGGATAACCT CCTCGGCAAC
GCCTGGAAAT ACACCGGCAC GCGGGATGAA GGGATCATCG AGTTCGGTAC GACAAAAGTC
GATGGAAAGC CTGCCTGTTT CGTCCGCGAC AACGGAGCCG GATTCGACAT GGCGGATGCG
GACAAGCTCT TTGCCCCTTT CCAGCGGCTT CCCGGCACCG ATGAATTCAG GGGACACGGC
ATCGGTCTCG CCACGGTGGA GCGGATCATC CAACGCCACG GCGGCCGGGT GTGGGCCAAG
GGGGAGCCGG GCAAGGGGGC GACCTTTTAC TTCACCCTTT CAACATGA
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| Protein sequence | MSTPDLDKEK ARQEQELRIQ RQIAFASGLF QGDVTVRTLL ESLAEGIVII DNSGTVLLVN
ARAEQMFGYP TKELIGKPHS ILIPERFRKA HEEHEAHFFA EPRIRPMGQL LDLAGRRRDG
SEFPVEISLS FIETINGVLV LAFVSDMTFR KQYESRLQDS EELFRIQVEC VKDYAIFMLD
AQGNVLNWNV GAERLKGYGE KEIIGRHFSC FYPEEERDAG KPAEELKKAA DEGRVEGEGW
LIRKDGSRFW ADVIITALRD ENGNLRGFSK VTRDISGRKM VEDALRFSEA RYRALFRDNP
TMIVTLDTEW TMLSVNPSCA SQLGYTIDEL EGQSVLKLFH EDDRPAVAEQ LHACLRNPDQ
VHRWQFRKIR KDGEVLWVEE IAQAVHDLNG TLNVLVVCQD VTERKRVEEA LIRSEQKFSL
AFQATPTVLV IASLEDGRYM EVNEAFERVM GYRRDEVIGR SSLELHIWQK PEDRAMVLRM
LAAGKKVREL EIGFRSKPGT FIVGLYSAEI IEIGTQRCLL SLVNDITARK RAEEEVEILN
TNLAARAFEL ETANRELEAF SYSVSHDLRK PLTVINGYCQ IIQESCGNNL NAQCQGYLQE
INDGTLSMNQ LIDALLNFSR LAHIEPRRET IDLSAMAHEV AEELKLVEPG RRVTFLITDG
VSADGDAGLL RVVLDNLLGN AWKYTGTRDE GIIEFGTTKV DGKPACFVRD NGAGFDMADA
DKLFAPFQRL PGTDEFRGHG IGLATVERII QRHGGRVWAK GEPGKGATFY FTLST
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