Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gura_3280 |
Symbol | trpA |
ID | 5163288 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter uraniireducens Rf4 |
Kingdom | Bacteria |
Replicon accession | NC_009483 |
Strand | - |
Start bp | 3852832 |
End bp | 3853635 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640550768 |
Product | tryptophan synthase subunit alpha |
Protein accession | YP_001232012 |
Protein GI | 148265306 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0159] Tryptophan synthase alpha chain |
TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAGAA TTGCAACAAC ATTTGCCAAC CTGGCGAAGC AGAATGAGAA GGCGCTTGTC ACGTTTATTA CCGCTGGCGA TCCTGATCTG GAAACAACGG AGAAACTGAT CCTGGAACTG GAAAAGTCCG GCGCCGATCT GATCGAACTG GGTGTACCTT TTTCCGATCC GATGGCTGAC GGACCGACTA TCCAGCTTTC TTCGGAGCGC GCCCTCTGCG CCGGTACGAC ACTGCCTAAA ATTTTAACCT TGGTAAAATC TGTTCGGCAA CAGACGGAGA TTCCCCTTAT TCTGATGGGG TATTACAACC CGGTCTTTCT TTATGGCATA GAGCGGTTTG TAGCCGATGC CGTGTCGGCG GGGGTTGATG GCGTGCTGCT GGTCGACCTG CCTCCTGAAG AAGCCGAAGA ATTCAAGGCG GCAGCGGATC GGGAAGGGTT AGACGTGATA TTCCTGCTGA CCCCCACATC CGATGAAGCC AGGATCAGGA AAGTGGCAAA TCTTGGCAGT GGTTTTATCT ACTATGTTTC GGTTACCGGC GTTACCGGTG CGCGGACGAG TGTTGCGGAT ACGGTTTTTC CCGATGTGAA AAAGATCCGG GAGCATGTAA CCTTGCCGCT TGTGGTCGGT TTCGGCATTT CCGACCCGGT GCAGGCCGGC CGGGTGGCAG CCGTTGCCGA TGGCGTGGTT GTAGGAAGTG CGCTGGTAAA GCTTTTCGAA GAATTCCGGG GGGATGAACT CCGAGAGCGG CTAGGCGGAT TTGTCGCAGC ATTGAAGGCA GGGGTGAAGG CGGTCGGTGG TTGA
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Protein sequence | MSRIATTFAN LAKQNEKALV TFITAGDPDL ETTEKLILEL EKSGADLIEL GVPFSDPMAD GPTIQLSSER ALCAGTTLPK ILTLVKSVRQ QTEIPLILMG YYNPVFLYGI ERFVADAVSA GVDGVLLVDL PPEEAEEFKA AADREGLDVI FLLTPTSDEA RIRKVANLGS GFIYYVSVTG VTGARTSVAD TVFPDVKKIR EHVTLPLVVG FGISDPVQAG RVAAVADGVV VGSALVKLFE EFRGDELRER LGGFVAALKA GVKAVGG
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