| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_3214 |
|---|
| Symbol | |
|---|
| ID | 5167039 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | - |
|---|
| Start bp | 3776727 |
|---|
| End bp | 3777767 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640550699 |
|---|
| Product | lipopolysaccharide heptosyltransferase I |
|---|
| Protein accession | YP_001231948 |
|---|
| Protein GI | 148265242 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
|---|
| TIGRFAM ID | [TIGR02193] lipopolysaccharide heptosyltransferase I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGGTCC TGATCGTTAA AATGAGCGCC ATGGGTGATA TAATCCATGC CTTGCCGGTA
TTGGATTACC TGCACAAGGT TTCACCGGGG ATCGAGATCG ACTGGCTGGT CGAGGAGCCT
TTCCTGGACG TTGTGGCCGG AAATCCGCTG ATCAGCACGA TCCATACGGC ACGCACCAAG
GTCTGGCGCA AGCGGCCTTT CGCCGTCAGT ACATTTCGTG AGATCGGCGC ATTGAAGCAG
GCGTTGCAGG AGAGGGCATT CGATGTCGTT TTCGATATCC AGGGGAACAT CAAGAGCGGC
GTCTTCGGCT GGCTGAGCGG TGTCGACAAC CGGATCGGCT TCAATGCCGA CGTCCTCCAG
GAACGGCTGA ACATGATGTT CACGACGCGC CAGATACCGT TGCGGCCCCA TGATTACCAT
ATCACCGACC AGTACCTGCG GCTTGTCAGC GTCCCCTTCG GTCGCGATTT CAGGAAAATG
CAGCTTTCAT CCGACATTTA CACGACGCCG GAGGACGACG CTGTCGCCGA GACACTTCTC
TCCACCCTGG CCGACGGGCT GGTATTCCTG TTCCATTACG GGACCACCTG GCAGACCAAG
TTCTGGAGCG AGAAGAGTTG GATCGAGCTG GGGAAGGCTT TGCTGGATAG GTTTTCGGAA
TCGTCAATCC TCCTTTCCTG GGGTAATGAT ACGGAGCGCC GTGTAGTAAT GGGTATTGCC
GCGGGTATCG GGCCCGGCGC CAGGGTGATT GAACGGTATT CGTTGAAAGG CTTGACCGCC
CTGCTGAAGA AGGTCGATCT GGTGGTGGGA GGTGACACGG GCCCTGTGCA TCTGGCCGCA
GCGGTCGGCA CGTCGACCGT TTCCTTTTAC CGCTCTTCCG ACGGCAAAAG GAGCGGTCCG
CGAGGCGATG GTCATGTGAT TGTCCAGTCC CCACTGCTGT GCGCCAGGTG TTTCAGGACA
CGATGTGACA AGGATGAGGA ATGCCGGCAA AGCATAACGG TGGAAGCCGT TGTATGTGGT
GTTGAAAAAC TTTTAACCTA G
|
|---|
| Protein sequence | MRVLIVKMSA MGDIIHALPV LDYLHKVSPG IEIDWLVEEP FLDVVAGNPL ISTIHTARTK
VWRKRPFAVS TFREIGALKQ ALQERAFDVV FDIQGNIKSG VFGWLSGVDN RIGFNADVLQ
ERLNMMFTTR QIPLRPHDYH ITDQYLRLVS VPFGRDFRKM QLSSDIYTTP EDDAVAETLL
STLADGLVFL FHYGTTWQTK FWSEKSWIEL GKALLDRFSE SSILLSWGND TERRVVMGIA
AGIGPGARVI ERYSLKGLTA LLKKVDLVVG GDTGPVHLAA AVGTSTVSFY RSSDGKRSGP
RGDGHVIVQS PLLCARCFRT RCDKDEECRQ SITVEAVVCG VEKLLT
|
|---|
| |