| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_2972 |
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| Symbol | |
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| ID | 5162880 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter uraniireducens Rf4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009483 |
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| Strand | - |
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| Start bp | 3435238 |
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| End bp | 3436683 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640550467 |
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| Product | RNA polymerase, sigma-54 subunit, RpoN |
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| Protein accession | YP_001231717 |
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| Protein GI | 148265011 |
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| COG category | [K] Transcription |
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| COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
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| TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000649238 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAATTG AAATGCGCCA ACAGATGAAG CTGAGCCAGC AACTGGTGAT GACCCCCCAG
TTGCAGCAGG CTATCAAGCT CCTTCAACTT TCACGGTTGG AACTCCAGGA CGTGGTGCGA
CAGGAGCTTG AAGAGAATCC GTTACTCGAT GAGGTGCCGG AACTTGAAGA GATCAAGGAG
ACGGAACAGC TCGAGTTGAG TGAAAAGGAA GTTGAGCCTG AAGTTCCTGC TACGGAATTC
CAGGAGGTCA CGGCTGGCGA AGAAACGCGC GAGATGGACT GGGAATCCTA TCTTGACGGT
TACAACTATA CGGCCGGTGA ACAGTATTAT GATGACGAAG AGCGACCTTC TTTTGAAAAT
CTTCTGACCA AGAAGAGTAC GCTTGTTGAC CATCTCATGT GGCAGTTGAG CCTTACCAAA
CTTACCGATG ACGAGATGAA AGTCGGTACG GAAATAATCG GTAACGTTGA TGATGACGGT
TACTTCCGGG CTTCTCTTGC AGATGTTGCG TTTGCCTGCC AGGTGGAAGA GCCTTTCGTT
GAGGCGGTGC TCAAGCGTAT TCAGGAGTTT GATCCGTCAG GTGTTGCGGC ACGGGATCTG
CGCGAGTGTC TCCTGATTCA GGTCAAGGCG CTCGGCATGG GTGGGAGTTT GGTTGAAGCT
GTGCTGACCG ATCATCTGAA AGACCTTGAG TCACGCAAAT ACAAACAGGC GGCCAGGGCT
CTGGGAGTCG ATGTCAACGA CATTCTGACG GCAACACGGA TCATCGCCAA TCTGGACCCG
AACCCGGGGC GGATGTTTGG CCAGGATGAC GTCCAGTACA TATCTGCGGA CATTTTCGTC
TATAAGATCG GTGAAGAGTA TGTGGTGGTG CTCAATGACG AGGGCATGCC CAATTTGAGG
ATCAACCCGC TCTATGCCGG CGAAGGCAAA ACAGGCGCGC AGGCTGATCC CAAGGCTGAA
GAATACATAA ACGACAAGAT GCGTTCCGCC ATGTGGCTTA TCAAGAGCAT CCAGCAGCGG
CAACGGACGG TCTACAAGGT GGCCAAGAGC CTCGTGAAAT TCCAGCGGGA TTTTCTGGAC
CGTGGGATCG AATATTTGAA GCCCCTGGTG TTGCGGGATA TTGCCGAGGA TATCGGCATG
CACGAGTCGA CCATCAGCCG CGTCACCACC AATAAGTACA TGCAGACGCC ACAGGGACTG
TATGAACTTA AATACTTCTT TAACAGCGGC ATATCTACCA ATGAAGGCGA TTTCATAGCT
TCGGAAAGCG TCAAGAACAA GATCAAGGAG ATCGTGGATG CCGAAGATCA GCGCAAGCCT
TATAGCGATC AGCGCCTGGC CGAGTTGCTC TCAGCACATA ACATCAACAT TGCGCAGCGC
ACCGTGACCA AGTATCGGGA GATGCTGCGA ATCGGTTCGT CTTCAGAGCG GAAAAAACAC
TTTTAA
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| Protein sequence | MAIEMRQQMK LSQQLVMTPQ LQQAIKLLQL SRLELQDVVR QELEENPLLD EVPELEEIKE
TEQLELSEKE VEPEVPATEF QEVTAGEETR EMDWESYLDG YNYTAGEQYY DDEERPSFEN
LLTKKSTLVD HLMWQLSLTK LTDDEMKVGT EIIGNVDDDG YFRASLADVA FACQVEEPFV
EAVLKRIQEF DPSGVAARDL RECLLIQVKA LGMGGSLVEA VLTDHLKDLE SRKYKQAARA
LGVDVNDILT ATRIIANLDP NPGRMFGQDD VQYISADIFV YKIGEEYVVV LNDEGMPNLR
INPLYAGEGK TGAQADPKAE EYINDKMRSA MWLIKSIQQR QRTVYKVAKS LVKFQRDFLD
RGIEYLKPLV LRDIAEDIGM HESTISRVTT NKYMQTPQGL YELKYFFNSG ISTNEGDFIA
SESVKNKIKE IVDAEDQRKP YSDQRLAELL SAHNINIAQR TVTKYREMLR IGSSSERKKH
F
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