| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_2949 |
|---|
| Symbol | |
|---|
| ID | 5165018 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | + |
|---|
| Start bp | 3415644 |
|---|
| End bp | 3417281 |
|---|
| Gene Length | 1638 bp |
|---|
| Protein Length | 545 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640550444 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001231694 |
|---|
| Protein GI | 148264988 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00000330729 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAAGCG CATCAAACAT TACCCTTGCC TACGGCAAGA GAGTCCTGTT CAAAGACGTC
AACATAAAGT TCACCCCCGG GAACTGCTAC GGACTAATCG GCGCCAATGG CGCAGGAAAA
TCCACCTTTC TGAAGATTCT CTCCGGCGAG GTGGAAGCAG ACAAGGGGGA GATCACGGTC
GGCCCCAGGG AAAGAATTGC AGTACTGCGA CAGGACCAGT TCGCCTTCGA TGAAGAGTCG
GTATTCAACA CCGTCATCAT GGGTCACGCA CGTCTATACC AGGTAATGGC CGAGCGGGAG
GCAATCTACT CCAAGGCGGA TTTCTCCGAG GCGGACGGGA TTCGCTCCGC GGAACTGGAG
GCGGAATTTG CCGAAATGAA CGGCTACGAG GTGGAGTCCG AAGCTGCTGT GCTCCTGAAC
GGTCTCGGCA TCTCCGAGGA ACTGCGGCAA AAGAAGATGA AGGAACTGGA AGCAGGGGAC
AAGGTGCGGG TGCTCCTCGC CCAAGCCCTC TTCGGCAACC CTGACGTGCT CTTGTTGGAC
GAGCCGACCA ACCACCTGGA CCTGAAGTCC ATCGCCTGGC TGGAGGATTT CCTCTACCGC
TTTTCAAACA CGGTCATCGT CGTTTCCCAC GACCGCCACT TCCTCAACCA GGTCTGCACC
CACGTGGCAG ATATCGACTT TGGCAGGATC CAGGTCTACG TGGGGAACTA CGACTTCTGG
TATCAGGCAA GCCAGTTGAC CCTCAAGCAG AAGCAAAACG ACAACCGCAA GGTTACCGAT
AAGGCCAACG AGCTGAAGGA GTTCATCCAG CGTTTCAGTT CCAACGCATC CAAGGCAAAA
CAGGCCACTT CGCGAAAAAA ACTCCTGGAG AAGCTCACCA TCGAGGAGAT GCCGGTTTCA
TCAAGGAAGT ACCCGTACGT GGTGTTCAAG CCGGAGCGCC CCTGCGGCGA CATCATCCTG
GAGATAAACG GTCTCTCCAA GCAGGTTGAC GGGATTGCGG TGTTAAACGA CCTCACGCTC
ACCGTCCGCA AAGGGGACAA GATCGCCTTT GTCGGCGCCA ACAGCCTGGC CAAGACGACC
CTCTTCCAGA TCCTCGCCGG CGAGCTGGAG CCGGACGCAG GTTCCTTCCG CTGGGGAATA
ACCATCACTC CCGCCTATTT CCCGAAGGAA AACAGCGCCT ACTTTGAAAA CGACCTGAAC
CTCATCGAAT GGCTCGGCCA GTTTTCTCCC CCCACCGAAG GGGAGTCTTT TGCCCGCGGT
TTCCTCGGCC GGATGCTTTT CTCCGGGGAA GAGGCGATGA AAAAGACCAG CGTCCTCTCA
GGCGGAGAGC GGGTCCGCTG CATGCTGTCG AAGGTGATGC TCACCGGCGC CAACGCCCTC
ATCCTCGACG AGCCGACCAA CCACCTGGAC CTGGAATCGA TCACCGCCCT GAACAACGGT
CTCATCGCCT TCACGGAGGT GGTACTTTTC TCCTCCCACG ACCACGAGTT CGTCTCCACC
GTGGCAAACC GGATCGTAGA GATCACCCCC GGCGGGATCA TCGACCGGGT AATGGGCTTC
GAAGAGTACC TGGAAGATGC CGAAGTAACG GGGCTTCGGG ACGAGCTGTT CCACGGCCAT
CAGGAACTGG CGCTATAA
|
|---|
| Protein sequence | MISASNITLA YGKRVLFKDV NIKFTPGNCY GLIGANGAGK STFLKILSGE VEADKGEITV
GPRERIAVLR QDQFAFDEES VFNTVIMGHA RLYQVMAERE AIYSKADFSE ADGIRSAELE
AEFAEMNGYE VESEAAVLLN GLGISEELRQ KKMKELEAGD KVRVLLAQAL FGNPDVLLLD
EPTNHLDLKS IAWLEDFLYR FSNTVIVVSH DRHFLNQVCT HVADIDFGRI QVYVGNYDFW
YQASQLTLKQ KQNDNRKVTD KANELKEFIQ RFSSNASKAK QATSRKKLLE KLTIEEMPVS
SRKYPYVVFK PERPCGDIIL EINGLSKQVD GIAVLNDLTL TVRKGDKIAF VGANSLAKTT
LFQILAGELE PDAGSFRWGI TITPAYFPKE NSAYFENDLN LIEWLGQFSP PTEGESFARG
FLGRMLFSGE EAMKKTSVLS GGERVRCMLS KVMLTGANAL ILDEPTNHLD LESITALNNG
LIAFTEVVLF SSHDHEFVST VANRIVEITP GGIIDRVMGF EEYLEDAEVT GLRDELFHGH
QELAL
|
|---|
| |