| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_2928 |
|---|
| Symbol | |
|---|
| ID | 5163891 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | - |
|---|
| Start bp | 3398189 |
|---|
| End bp | 3398944 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640550423 |
|---|
| Product | beta-lactamase domain-containing protein |
|---|
| Protein accession | YP_001231673 |
|---|
| Protein GI | 148264967 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.391468 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGAAGA GCAAAACCTT ACGCTGGTTA TGGTTCGTTA CGGCGGTTAC CCTGCTGTTG
ATCGCGTGCC TGATTGCAAC AGGGCAGGAC AAGTCGCTGC ATAAATCTGA AAAGAGGAGC
CCTATGATTT TCGAAACCGT AGTAGTCGGT CAGCTGGGTG TCAATTGTTT CATCCTCGGC
TGCGAGGAAA CCAAAGAGGG TATAGTGGTC GATCCCGGCG CGGATGCGGA CCGGGTGCTG
GCAGCCGTGA AAAAGTCGGG ACTGGCCATA AAGTATGTGC TCAATACCCA TGGCCATTTT
GATCATGTGG GGGGAAACCG GCGGCTGCTC GAAGCCACCG GCGCAAAGCT GTTGATCCAC
GAGGCGGACG TCTATTTCCT CTCACGCGCC GCAGAGGTGG CCGCCGCCTA CGGCCTGAAA
ACGGAGAATT CCCCCAAGCC GGATGGGCTT CTGGAGGATG GGATGGTGGT GATCTTCGGC
TCCCAGCAGC TGAAAGTGCT CCATACGCCG GGACACACGC CGGGTGGGTG CTGCCTGTAT
CTGGAGAGCG AGGGTAAGGT CATCACCGGC GATACCCTGT TTGCCGATGG GGTGGGGCGG
ACCGATTTTC CCGGCAGCTC CCACGAGGCG CTGATCGAGG GAATACGGAA CAAGCTGTTT
ACCCTTCCCG AACCGACTCT GGTCTATCCG GGGCACGGCC CCTCTTCCAA CATTGGTCAT
GAGAAGTCGA ATAATCCCTA CGTAAGAGGC ATATGA
|
|---|
| Protein sequence | MTKSKTLRWL WFVTAVTLLL IACLIATGQD KSLHKSEKRS PMIFETVVVG QLGVNCFILG
CEETKEGIVV DPGADADRVL AAVKKSGLAI KYVLNTHGHF DHVGGNRRLL EATGAKLLIH
EADVYFLSRA AEVAAAYGLK TENSPKPDGL LEDGMVVIFG SQQLKVLHTP GHTPGGCCLY
LESEGKVITG DTLFADGVGR TDFPGSSHEA LIEGIRNKLF TLPEPTLVYP GHGPSSNIGH
EKSNNPYVRG I
|
|---|
| |