Gene Gura_2905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGura_2905 
Symbol 
ID5163590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter uraniireducens Rf4 
KingdomBacteria 
Replicon accessionNC_009483 
Strand
Start bp3368056 
End bp3370404 
Gene Length2349 bp 
Protein Length782 aa 
Translation table11 
GC content55% 
IMG OID640550400 
Productputative GAF sensor protein 
Protein accessionYP_001231650 
Protein GI148264944 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1080] Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) 
TIGRFAM ID[TIGR01417] phosphoenolpyruvate-protein phosphotransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000121326 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCGAAG ACAGCCGTGA AACACTGGGA CTCCGCACGC TGGAAGACAT CAGCGGTTTG 
ATTCTCCACT CCCACGATTT ACAGGAGACG CTGGATAATA TAGTCAACCT TGTGGCAAAG
CGAATGGGTT CCGACGTTTG CTCCATCTAC CTTTTGGAAG ACGACGGCGA AACCCTCCGG
CTCAAGGCCA GCAAGGGTCT TTCCAAGGGG TCGGTAGGAA AGATCACCAT GAAGACCTCG
GAAGGCCTCA CCGGCCTGGC TGTGGAGCAG CGGGGAATAG TGGCGACCGA CAATGCCCCG
CTCCATCCAC GCTATAAATA CTTCCGCGAA ACCAAGGAAG AAAAATTCCA GTCCTTTCTG
GGCGTCCCCC TGTTCGAGCG CAAAACGCCC GTCGGCGTAA TAGTCGTTCA AACCCGCGAA
TCGAGGGTCT TCACCCCGGC GGAGATAAGC ACCATCTCCA CCATCGCCTA CCAGATCAGC
AGCATCGTCA TCAACGCCAA GCTACTCGAC TCCGTTCATC AGAAGGAGGA AGAGCGCGCC
TTTTTTGCAC TGGAACTCGA AAAAATGAAG GCCGGCGGCG TCATGGAGGG CGTAACTGCC
GGACCGGCAA AGAAGAGCGC CAAACAGCCG TTCTCGTTGA CCGGGACGGC GGTATCACCC
GGTTTTTCCT GGGGAAAGAT CTATATCCTG AACCGCAACA CAAAGGACTG CATCGAGCTG
GAACGGATCA GACCGCGCCC GGAAGAACGC AAGCGGTTTC AGATCGCCCT GGAAAAGGCG
AAGATCCAGA CACTCTACAT GGAAAAACGT GTGGCTGAGA TACTCTCCAA AGAGGACGCC
GCAATCTTCC ACAGCCACCT CATGATTATG GAAGACCGCG GTTTCGTTGC CAAGATTGTG
GACCTCATAG ACAGTGATTA CGGTGCAAGC CGGGCCGTGA AGGAAGTGGT CGGCTACTAC
GTGCAGGCCT TCTCCAAGAT GGAAGACCCG TACCTGCGGG AACGTTCCGC GGACATGGAA
GACATCGGCC GGCGCATCAT CGATGCCCTC AACGGCAACA GCCGCACTCA GGCGAAGTTC
AGGGAAAAAC GGATAATTGT TGCCGACGAC ATCCTTCCCT CGGACATGGC AACCATGGAC
CATGAAAAAA TCCTCGGCAT TGTCACGGAG AAAGGTAACG TGAATTCCCA TGCCGCCATC
ATGGCCAAAT CCCTCGGTAT TCCGGCGGTG CTCGGCGTGG ATGGTTTAAT GAAGCACATC
GCCCTCCGCA ACGAGGTGAT AGTTGACGGC ACTTCCGGGC ACATCTACAT AAATCCGGAC
AACAGCATAA AGGTCGAGTA CGAAAGACTA CAGCGGGATT TCAGCCTCAA ACAGCGCGAA
CTCGATGGGC TGCGCGACCT GCCGGCTGAA ACCAAAGACG GCGTCAGGGT CTCGCTGCGG
GCAAACATCG GTCTTTTAAA CGATGTCAAG GTTGCACTGG CCAATGGCGC CGAAGGGGTC
GGTCTCTACC GCACGGAATT CCCGTACATG GCCCGCAAAT CCTTTCCCAA CAGGGTTGAA
CAGTACACAC TTTACCGGAA AATACTCGAA GGCTTCCATG GTCACACGGT CGCCATCCGC
ACCCTGGACA TCGGCGGGGA CAAAGGACTT TCCTACTTCG CCTACCCCAA GGAGGACAAC
CCGTTCATGG GGTGGCGCTC CATCAGGGTC TCCCTGGAAG AGGAAGGCAT CTTTCGCGAG
CAGCTCGCCG GAATACTCAT GGCCTCGACC TACGGCAAGG CCACCATCAT GTTCCCGATG
ATTTCGAGTG TCGATGAGAT CAGGACAATC AAGAGGATCT TGAAAGAAGT TCAGAACGAA
CTGGTGCAGG ATGAGAAACC GTTCGATACC GACATCCGAC TCGGGATCAT GGTGGAGATA
CCGGCCGCCG TCCAGATCGC CGACATTCTC ATCAAGGAAG TGGACTTTTT CAGCATCGGC
ACCAACGACC TGATTCAGTA CACCATGGCG GCGGACCGCA ACAACCCGAA GGTGAAAAAA
TACTACGACC CCTATCACCC GGCCGTGCTG CACTCCATCA AACAAGTGGC TGATGCGGCA
AAAAAGGCGC ATAAGCAGGT TTCGCTCTGC GGAGAGATGG CCGCAGACCC GGTTACCGCT
GTGCTCCTGC TCGGCATGGG GATAACGGAT TTTAGTCTGT CGGCCCCATA CATACCTCTC
ATCAAACAGG CAATACGATG CGTGGACATG GCTGAGGCGC GAAGGATCGC CGAACATGCA
CTGCAGATGG AGAGCAGCAG CGCTATCCGC GAATATCTGG AGAAAATAAA GTCAGAGCTC
GGACTATGA
 
Protein sequence
MGEDSRETLG LRTLEDISGL ILHSHDLQET LDNIVNLVAK RMGSDVCSIY LLEDDGETLR 
LKASKGLSKG SVGKITMKTS EGLTGLAVEQ RGIVATDNAP LHPRYKYFRE TKEEKFQSFL
GVPLFERKTP VGVIVVQTRE SRVFTPAEIS TISTIAYQIS SIVINAKLLD SVHQKEEERA
FFALELEKMK AGGVMEGVTA GPAKKSAKQP FSLTGTAVSP GFSWGKIYIL NRNTKDCIEL
ERIRPRPEER KRFQIALEKA KIQTLYMEKR VAEILSKEDA AIFHSHLMIM EDRGFVAKIV
DLIDSDYGAS RAVKEVVGYY VQAFSKMEDP YLRERSADME DIGRRIIDAL NGNSRTQAKF
REKRIIVADD ILPSDMATMD HEKILGIVTE KGNVNSHAAI MAKSLGIPAV LGVDGLMKHI
ALRNEVIVDG TSGHIYINPD NSIKVEYERL QRDFSLKQRE LDGLRDLPAE TKDGVRVSLR
ANIGLLNDVK VALANGAEGV GLYRTEFPYM ARKSFPNRVE QYTLYRKILE GFHGHTVAIR
TLDIGGDKGL SYFAYPKEDN PFMGWRSIRV SLEEEGIFRE QLAGILMAST YGKATIMFPM
ISSVDEIRTI KRILKEVQNE LVQDEKPFDT DIRLGIMVEI PAAVQIADIL IKEVDFFSIG
TNDLIQYTMA ADRNNPKVKK YYDPYHPAVL HSIKQVADAA KKAHKQVSLC GEMAADPVTA
VLLLGMGITD FSLSAPYIPL IKQAIRCVDM AEARRIAEHA LQMESSSAIR EYLEKIKSEL
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