Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gura_2905 |
Symbol | |
ID | 5163590 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter uraniireducens Rf4 |
Kingdom | Bacteria |
Replicon accession | NC_009483 |
Strand | + |
Start bp | 3368056 |
End bp | 3370404 |
Gene Length | 2349 bp |
Protein Length | 782 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640550400 |
Product | putative GAF sensor protein |
Protein accession | YP_001231650 |
Protein GI | 148264944 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1080] Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) |
TIGRFAM ID | [TIGR01417] phosphoenolpyruvate-protein phosphotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000121326 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCGAAG ACAGCCGTGA AACACTGGGA CTCCGCACGC TGGAAGACAT CAGCGGTTTG ATTCTCCACT CCCACGATTT ACAGGAGACG CTGGATAATA TAGTCAACCT TGTGGCAAAG CGAATGGGTT CCGACGTTTG CTCCATCTAC CTTTTGGAAG ACGACGGCGA AACCCTCCGG CTCAAGGCCA GCAAGGGTCT TTCCAAGGGG TCGGTAGGAA AGATCACCAT GAAGACCTCG GAAGGCCTCA CCGGCCTGGC TGTGGAGCAG CGGGGAATAG TGGCGACCGA CAATGCCCCG CTCCATCCAC GCTATAAATA CTTCCGCGAA ACCAAGGAAG AAAAATTCCA GTCCTTTCTG GGCGTCCCCC TGTTCGAGCG CAAAACGCCC GTCGGCGTAA TAGTCGTTCA AACCCGCGAA TCGAGGGTCT TCACCCCGGC GGAGATAAGC ACCATCTCCA CCATCGCCTA CCAGATCAGC AGCATCGTCA TCAACGCCAA GCTACTCGAC TCCGTTCATC AGAAGGAGGA AGAGCGCGCC TTTTTTGCAC TGGAACTCGA AAAAATGAAG GCCGGCGGCG TCATGGAGGG CGTAACTGCC GGACCGGCAA AGAAGAGCGC CAAACAGCCG TTCTCGTTGA CCGGGACGGC GGTATCACCC GGTTTTTCCT GGGGAAAGAT CTATATCCTG AACCGCAACA CAAAGGACTG CATCGAGCTG GAACGGATCA GACCGCGCCC GGAAGAACGC AAGCGGTTTC AGATCGCCCT GGAAAAGGCG AAGATCCAGA CACTCTACAT GGAAAAACGT GTGGCTGAGA TACTCTCCAA AGAGGACGCC GCAATCTTCC ACAGCCACCT CATGATTATG GAAGACCGCG GTTTCGTTGC CAAGATTGTG GACCTCATAG ACAGTGATTA CGGTGCAAGC CGGGCCGTGA AGGAAGTGGT CGGCTACTAC GTGCAGGCCT TCTCCAAGAT GGAAGACCCG TACCTGCGGG AACGTTCCGC GGACATGGAA GACATCGGCC GGCGCATCAT CGATGCCCTC AACGGCAACA GCCGCACTCA GGCGAAGTTC AGGGAAAAAC GGATAATTGT TGCCGACGAC ATCCTTCCCT CGGACATGGC AACCATGGAC CATGAAAAAA TCCTCGGCAT TGTCACGGAG AAAGGTAACG TGAATTCCCA TGCCGCCATC ATGGCCAAAT CCCTCGGTAT TCCGGCGGTG CTCGGCGTGG ATGGTTTAAT GAAGCACATC GCCCTCCGCA ACGAGGTGAT AGTTGACGGC ACTTCCGGGC ACATCTACAT AAATCCGGAC AACAGCATAA AGGTCGAGTA CGAAAGACTA CAGCGGGATT TCAGCCTCAA ACAGCGCGAA CTCGATGGGC TGCGCGACCT GCCGGCTGAA ACCAAAGACG GCGTCAGGGT CTCGCTGCGG GCAAACATCG GTCTTTTAAA CGATGTCAAG GTTGCACTGG CCAATGGCGC CGAAGGGGTC GGTCTCTACC GCACGGAATT CCCGTACATG GCCCGCAAAT CCTTTCCCAA CAGGGTTGAA CAGTACACAC TTTACCGGAA AATACTCGAA GGCTTCCATG GTCACACGGT CGCCATCCGC ACCCTGGACA TCGGCGGGGA CAAAGGACTT TCCTACTTCG CCTACCCCAA GGAGGACAAC CCGTTCATGG GGTGGCGCTC CATCAGGGTC TCCCTGGAAG AGGAAGGCAT CTTTCGCGAG CAGCTCGCCG GAATACTCAT GGCCTCGACC TACGGCAAGG CCACCATCAT GTTCCCGATG ATTTCGAGTG TCGATGAGAT CAGGACAATC AAGAGGATCT TGAAAGAAGT TCAGAACGAA CTGGTGCAGG ATGAGAAACC GTTCGATACC GACATCCGAC TCGGGATCAT GGTGGAGATA CCGGCCGCCG TCCAGATCGC CGACATTCTC ATCAAGGAAG TGGACTTTTT CAGCATCGGC ACCAACGACC TGATTCAGTA CACCATGGCG GCGGACCGCA ACAACCCGAA GGTGAAAAAA TACTACGACC CCTATCACCC GGCCGTGCTG CACTCCATCA AACAAGTGGC TGATGCGGCA AAAAAGGCGC ATAAGCAGGT TTCGCTCTGC GGAGAGATGG CCGCAGACCC GGTTACCGCT GTGCTCCTGC TCGGCATGGG GATAACGGAT TTTAGTCTGT CGGCCCCATA CATACCTCTC ATCAAACAGG CAATACGATG CGTGGACATG GCTGAGGCGC GAAGGATCGC CGAACATGCA CTGCAGATGG AGAGCAGCAG CGCTATCCGC GAATATCTGG AGAAAATAAA GTCAGAGCTC GGACTATGA
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Protein sequence | MGEDSRETLG LRTLEDISGL ILHSHDLQET LDNIVNLVAK RMGSDVCSIY LLEDDGETLR LKASKGLSKG SVGKITMKTS EGLTGLAVEQ RGIVATDNAP LHPRYKYFRE TKEEKFQSFL GVPLFERKTP VGVIVVQTRE SRVFTPAEIS TISTIAYQIS SIVINAKLLD SVHQKEEERA FFALELEKMK AGGVMEGVTA GPAKKSAKQP FSLTGTAVSP GFSWGKIYIL NRNTKDCIEL ERIRPRPEER KRFQIALEKA KIQTLYMEKR VAEILSKEDA AIFHSHLMIM EDRGFVAKIV DLIDSDYGAS RAVKEVVGYY VQAFSKMEDP YLRERSADME DIGRRIIDAL NGNSRTQAKF REKRIIVADD ILPSDMATMD HEKILGIVTE KGNVNSHAAI MAKSLGIPAV LGVDGLMKHI ALRNEVIVDG TSGHIYINPD NSIKVEYERL QRDFSLKQRE LDGLRDLPAE TKDGVRVSLR ANIGLLNDVK VALANGAEGV GLYRTEFPYM ARKSFPNRVE QYTLYRKILE GFHGHTVAIR TLDIGGDKGL SYFAYPKEDN PFMGWRSIRV SLEEEGIFRE QLAGILMAST YGKATIMFPM ISSVDEIRTI KRILKEVQNE LVQDEKPFDT DIRLGIMVEI PAAVQIADIL IKEVDFFSIG TNDLIQYTMA ADRNNPKVKK YYDPYHPAVL HSIKQVADAA KKAHKQVSLC GEMAADPVTA VLLLGMGITD FSLSAPYIPL IKQAIRCVDM AEARRIAEHA LQMESSSAIR EYLEKIKSEL GL
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