Gene Gura_2799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGura_2799 
SymbolispG 
ID5166497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter uraniireducens Rf4 
KingdomBacteria 
Replicon accessionNC_009483 
Strand- 
Start bp3259992 
End bp3261050 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content60% 
IMG OID640550295 
Product4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 
Protein accessionYP_001231545 
Protein GI148264839 
COG category[I] Lipid transport and metabolism 
COG ID[COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis 
TIGRFAM ID[TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.000330305 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAG CAACCAGACA GATCCAGATA GGTAATGTAA AGATAGGCGG CGGGGCGCCC 
TGCTCCGTGC AATCCATGTG CAGCACCGAT ACCCGTGACG TGTCCGCAAC CCTGGCGCAG 
ATCGGGAGAC TTGCCGAAGC GGGCTGCGAG TTGGTCCGTT GCGCTGTACT GGATATGGAT 
GCGGCCGAAG CGCTCGGCAA GATCAAGGCG CAAAGCCCGA TGCCGGTTAT TGCCGATATC 
CATTTCGACT ATAAGCTGGC ACTCAAGGTG CTGTCAGGGG GCATCGACGG TCTCAGGCTC 
AACCCGGGCA ACATCGGCGA GCGTTGGAAG GTGGCCGAGG TGGTACAGGC TGCTGCCGAA 
CGGCGGGTGC CGATCCGCAT CGGTGTCAAT GCCGGCTCTC TGGAGAAGGA GCTCTTGCAG 
AAGTACGGCC ATCCCACGGC CGAGGCGATG GTGGAATCTG CGCTGGGTCA TGTGCGCATC 
CTTGAGGAGC TTGGCTACGA CCAGATTAAA ATATCGCTCA AGGCTTCCGA CGTGATGAAG 
ACGGTGTCGG CTTACCGGCT TCTTTCCGAC GCGGTTGATT ATCCCCTCCA TATCGGCATT 
ACCGAGGCCG GGACGATCTT TTCAGGGACC ATCAAGTCTT CGGTGGGACT CGGCATCCTC 
CTGGCAGACG GGATCGGCGA CACCATGCGC GTCTCCCTGA CCGGCGATCC GGTGGATGAG 
GTGCGGGTCG GTTTCGAGAT ATTGAAGGCG CTCGGGATAA GGCAGCGTGG GATCAACTTC 
GTTTCCTGCC CTACCTGTGG CCGCTGTCAG ATCAACCTCA TTCATGTGGC CGAAGAGGTG 
GAAAAGAGAT TGAGGGGCAT CGACAAACCG CTCACCGTGG CGGTAATGGG GTGCGTGGTC 
AACGGCCCCG GCGAGGCCCG CGAGGCTGAT GTGGGAATTG CCGGCGGCAA GGGGGAGGGG 
TTACTCTTCC GTCATGGTGA GATCGTCCGC AAGGTGCCGG AGAATGAACT GGCCGACGCC 
CTGGTGGCTG AGGTTTTAGA GGCAGTGAAG GGTGAATGA
 
Protein sequence
MKKATRQIQI GNVKIGGGAP CSVQSMCSTD TRDVSATLAQ IGRLAEAGCE LVRCAVLDMD 
AAEALGKIKA QSPMPVIADI HFDYKLALKV LSGGIDGLRL NPGNIGERWK VAEVVQAAAE 
RRVPIRIGVN AGSLEKELLQ KYGHPTAEAM VESALGHVRI LEELGYDQIK ISLKASDVMK 
TVSAYRLLSD AVDYPLHIGI TEAGTIFSGT IKSSVGLGIL LADGIGDTMR VSLTGDPVDE 
VRVGFEILKA LGIRQRGINF VSCPTCGRCQ INLIHVAEEV EKRLRGIDKP LTVAVMGCVV 
NGPGEAREAD VGIAGGKGEG LLFRHGEIVR KVPENELADA LVAEVLEAVK GE