| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_2743 |
|---|
| Symbol | |
|---|
| ID | 5165192 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | - |
|---|
| Start bp | 3183932 |
|---|
| End bp | 3186721 |
|---|
| Gene Length | 2790 bp |
|---|
| Protein Length | 929 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640550239 |
|---|
| Product | PAS/PAC sensor hybrid histidine kinase |
|---|
| Protein accession | YP_001231490 |
|---|
| Protein GI | 148264784 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00773709 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAAAC TCTTTAATTC GGGTGCTGCA TCCGATTGGC AATTGCAGGC TGTGCTCAAT
GCGGCAACGG AAATTTCAAT CATTGCAACT GATACGCTTG GCCTGATAAC CATGTTCAAT
CGCGGTTCCG AACGTATGTT GGGCTATACG GCAGATGAAG TGGTCGGCGT AGCTTCTATT
GACCTCTTCC ATCTGGAAAC CGAAGTACGC GGCCGAGGTG AAGAGATGAG CCGGGCCCTG
GGCAGAAATG TCTCAGGTTT TGATGTGTTT GTGGAAAACG TCAAACAGAC CGGAGCCGAG
ACTCGTGAAT GGTTCTATGT CCGCAAGGAT GGCGATGTTT TCCTCGTTAA ATTGACAATC
ACCATTATTC ATGATGAACA AGACCGGGTA ATCGGCTATC TGGGGGTGGC GGAGGATATA
TCCGATCGCA AGGCAATGGA AATAGAACTC ATAGAGAATA AGAACCTGCT CGGTTCAATT
CTCGAGTCCA TCCCCAACCC TATATTCTAC AAAAACGCGG ATGGTGTCTA TGTGAACTGC
AACAAGGCAT TCAGTTCATA TCTCGGCATT CCCAGGGAGA AAATCATTGG TTCTACGGTC
TATGATATTG CACCGAAAGA ACTTGCCGAT ATATATCATC ATGCAGATAT GAAATTAATG
CATGAACGGG ATCCGCAGGT TTATGAAGCA CAGGTGAGAT ATGCCGATGG ATTGTTGCGT
GATGTACTCT TTTATAAGTC GTTGATTTGG GGAAATAATG GTTCTTTGCA AGGACTTGTC
GGGGTTATGC TCGATGTCAC TGAGCGCAAG CGGATTGAGA CAGAACTTCA CGAGCAGGCG
ATTCTGCTTG AACAGGAAAT TGCGGAGCAT CAGTGTGCTG AAGAGACGCT GCGGGAAAGC
GAGGAACAAC TCCGCGTCAT CTTTGAGACC TCTCAGGCGT CCATATTCCT GGTTTCTCCG
GTGGGGCGGA TTATATTCGC CAATCATCGT ATGGCGGAAA TGTTCGGCTG CACCTACGAA
GAGTTGATCG GCTCCCATTA TCAGGACTAT CTGCACCCGT CGGAAAAGAT GGTCGGTGGC
GCTCGTATGA GAAAACTGAT TGACGGGGAA ATTGATCATG TAAGCACCGA ACGACACTAT
GTGCGCAAGG ACGGGGGTGA TTTCTGGGGT TACCTGTCCG GCAGGCGGCT GGAAGGTCCT
GACGGTAATC TCAGGGCACT GGTCGGCATT ATCACGAATA TTACCGATCT GAAAAAGGCG
AAGGACGATC TGGAGAAAGA AAAGGAACGA CTGGGGGTAA CGCTGCGTTC CATCGGTGAC
GGCGTCATTA CAGTCGATAC CGATGAGCGG ATTGTCATGC TTAACAGGGT GGCAGAGCAG
CTTTGCGGCT GGAGCCAGGA AGAGTCGAAG GGGAAGATCC TCAGCGAAGT CTTCCACATG
ATAAACGAAA AAAGCAGGGC TGTCGTGAAT AATCCCGTCG GTCGGGTGCT TAAGACTGGC
ATGATAATGG AGCTTACCAA TCACACTATC CTCGTTGCCC GTGACGGTTC GGAACGTGTG
ATTGCTGACT CAGCCGCTCC CATCCTTGAT CAGGAAGGCG CCATCATTGG GGTTGTCCTC
GTGCTCCGCG ACATGACTGA AAAAAAGGAG ATCGAGGAAG AGCTGTTCAA GGCGCGCAAG
CTGGACTCTC TGGGTATTCT GGCCGGAGGG ATCGCTCATG ATTTCAACAA TCTTCTGACA
GGCATCCTGG GAAACGTCTC TATGGCAAGG ATGATAATTC CACCGGATCA TGATGCTTAC
CTGCTTTTGG ATCGAGCCCA GAAGGCTTCA GAACGGGCAC GGGACCTGAC GCAACAGTTA
CTTACCTTCT CCAAGGGAGG GGCGCCGGTG AAGAGGCTGA CCGGCATCGA GCATATTCTC
GTTGATTCTG CAACGTTCGC CCTCAGGGGG TCGAACGTTC GCTGCGAATT TGCTATCCCG
GCCGACCTTT GGCCGGCCGA GATCGATGCA GGACAGATGA GCCAGGTAAT AAACAATCTG
GTCATCAATG CTGATCAAGC CATGCCGGAT GGAGGGGTTA TCAGTATTCA GGCGGAAAAT
ATAGAAACTT TCAGCGATGG GGATAACCCG GACGACGGGA GAATAATTCA GCTTACCATC
AAGGATACGG GAATAGGTAT TCTTGAGGAA CATCTTCAGC GGATATTCGA CCCTTATTTT
ACCACCAAGC ATCACGGCAG CGGGCTTGGT TTAGCCACTG TTTATTCAAT AGTCAAGAAT
CATAACGGAG AAATAAGGGT TGTTTCACAA ACTGGCGTGG GAACGACTTT TATCATTCGT
CTCCCGGCAT CACCAACGGC GCCGACCGTC AATGAAAAGA AGGTTGATGA CCATCGGGCG
GGAAAAGGCA AAATTCTGTT CATGGATGAC GAGGAGATGA TCCGCGAGTC GATGGAAGTC
GCACTCAAGA TGCTCGGCTA TGAACCGACT GTCTGTGGCG ACGGCATAGA GGCTGTGGAA
CTATACAGGC AGGCAACGGC AGCAGGAACA CCATTCGCCG GCGTCATAAT GGATTTGACG
ATACCTGGAG GAGTGGGTGG GAAGGATGCT ATTGCCAAAC TTCTCGAGAT AGACCCGGCA
GCCAGGGTGA TTGTATCCAG CGGTTACTCA AGTGACCCTA TAATGGCACA TTACGCTCAA
TACGGATTCT GCGGCGCCAT CAGCAAGCCG TACAATTGTA AGGAACTGGG AGCCTCGTTG
CGGGAAATTC TGGAAAATAG TCCGGGGTAG
|
|---|
| Protein sequence | MSKLFNSGAA SDWQLQAVLN AATEISIIAT DTLGLITMFN RGSERMLGYT ADEVVGVASI
DLFHLETEVR GRGEEMSRAL GRNVSGFDVF VENVKQTGAE TREWFYVRKD GDVFLVKLTI
TIIHDEQDRV IGYLGVAEDI SDRKAMEIEL IENKNLLGSI LESIPNPIFY KNADGVYVNC
NKAFSSYLGI PREKIIGSTV YDIAPKELAD IYHHADMKLM HERDPQVYEA QVRYADGLLR
DVLFYKSLIW GNNGSLQGLV GVMLDVTERK RIETELHEQA ILLEQEIAEH QCAEETLRES
EEQLRVIFET SQASIFLVSP VGRIIFANHR MAEMFGCTYE ELIGSHYQDY LHPSEKMVGG
ARMRKLIDGE IDHVSTERHY VRKDGGDFWG YLSGRRLEGP DGNLRALVGI ITNITDLKKA
KDDLEKEKER LGVTLRSIGD GVITVDTDER IVMLNRVAEQ LCGWSQEESK GKILSEVFHM
INEKSRAVVN NPVGRVLKTG MIMELTNHTI LVARDGSERV IADSAAPILD QEGAIIGVVL
VLRDMTEKKE IEEELFKARK LDSLGILAGG IAHDFNNLLT GILGNVSMAR MIIPPDHDAY
LLLDRAQKAS ERARDLTQQL LTFSKGGAPV KRLTGIEHIL VDSATFALRG SNVRCEFAIP
ADLWPAEIDA GQMSQVINNL VINADQAMPD GGVISIQAEN IETFSDGDNP DDGRIIQLTI
KDTGIGILEE HLQRIFDPYF TTKHHGSGLG LATVYSIVKN HNGEIRVVSQ TGVGTTFIIR
LPASPTAPTV NEKKVDDHRA GKGKILFMDD EEMIRESMEV ALKMLGYEPT VCGDGIEAVE
LYRQATAAGT PFAGVIMDLT IPGGVGGKDA IAKLLEIDPA ARVIVSSGYS SDPIMAHYAQ
YGFCGAISKP YNCKELGASL REILENSPG
|
|---|
| |