| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_2699 |
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| Symbol | |
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| ID | 5164649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter uraniireducens Rf4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009483 |
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| Strand | - |
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| Start bp | 3134933 |
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| End bp | 3137224 |
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| Gene Length | 2292 bp |
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| Protein Length | 763 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640550194 |
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| Product | ribonuclease R |
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| Protein accession | YP_001231446 |
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| Protein GI | 148264740 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases
[TIGR02063] ribonuclease R |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0320356 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATAG GTAAAGATGC GGTAGTAAAA CTACTGCGCA GTCATGCCGG GGTTCCCATG
GAGTTCAGGG AACTCATGCA GGCTTTCGGC ATAAACAAGG CGCAAAGGCC CCAGTTCAAG
GAGATCATCG ACGGCTTCGT CGAAGATGGC GTGCTGGTCA GGCTGAAAGG GCGGCTCTAT
GTTCTGCCGA CGGAAACGGC CGGGATCGTC GGGAAACTCA CTGTCCACCG CGACGGCTAC
GGTTTCGTTA TCCCGGAAGC CGGCAAGGAA GACATCTTCA TACCGGCCCG ATATCTGCGG
GAAAACATGC ATGGCGACAA GGTGGAGGTG CGGATCGTAG CCAAAAAACG GGACGGCAAG
CAGGAGGGCC GTATCGTAAA AACCGTCGAG CGCGGTTTCA CTAAAATTGT CGGGCGGTTT
GAGTCGGCGC GAGAGTTCGG CCGGGTGATA CCGGACGAGG TGCGCATAAA CCGGGATATC
CTGATTCCGA TAAAGGCTTC CGGAAAGGCG CAAAACGGCC AGGTGGTAGT TGCGGAGATA
ACTTCCTATC CGGTTGCCGG AAAAGGCTTG GAAGGGAGGA TCGTCGAGGT GCTCGGCTGG
CCGGATGAGC CGGAAGTCGA GGTGCAGACG ATCATCAGGA AGTACGATCT TCCCTATATT
TTCCCCGCCG AGGCCCTGTC CGGCGCCCGC GCCGTATCAC AATCGGTGAC CGCTGCCGAC
CTCGAAGGGA GAACCGACCT GCGCGGGCGA CCGACCGTCA CCATTGACGG GGAAACGGCC
AGGGATTTCG ACGATGCGGT TTCGGTGAAA AGGGAGGGCA AAGGCAATAT CCGGCTCTGG
GTTTCTATTG CGGACGTTTC CCACTACGTG AAGCCCGGTT CTCCAATCGA TCGGGAGGCG
TACCTGCGCG GCACGTCGGT CTATTTCCCC GACCGCTGCA TACCGATGCT GCCGGAAGAG
CTCTCAAACG GCATCTGTTC GTTAAACCCG ACGGTAGACA GGCTGACGGT GACGGCGGAG
ATGCTTTTCG GTCCGTCCGG CGAGATGCTC CAGGCCTCGT TTTATCCGAG CGTGATAAAA
AGCGCCGCCC GACTTACCTA CACCATCGTC AAAAATATCC TGGTGGAGAA GGACCAGAAG
CTCTGTGAAG AGTACGAGGA CCTTGTTGCC GATCTCAAGG TGATGGAAGA GCTGGCCCTG
CGCCTGATGA CCAAGCGGAA AAAGCGCGGA AGCATCGATT TTGACCTGCC TGAACCGGAG
ATATTGCTCG ACATGCAGGG GGGGACCCTT GCCATTATCC GCGCCGAGCG CAACCTGGCC
CACAAGATCA TCGAAGAATG CATGCTCGCC GCCAACGAGG CTGTGGCCTC GCACATCGAA
GAGCGCCACA TACCTTCCCT CTATCGGGTC CATGAGACTC CGGACTTTGC CAAGCTGCAG
GACTTCAGAG AGTTTGTCTT CAATTTCGGC TATGAGCTGC GCCTCAAGGA GGAGAGTGTG
GAGCCGGGTG AGTTCCAGCG GCTCCTCGAT CAGGCGGAGG GAAAACCGGA AGAGCGGATG
ATCAACGAGG TGCTACTCCG CTGCATGAAG CAGGCCCGCT ATTCTGCGGA AAACCTCGGC
CACTTCGGCC TTGCCGCAGC CTCGTACACC CATTTCACCT CGCCGATCCG CCGCTATCCC
GACCTGGTGG TCCACCGGAT ACTGAAGACG CTCATCGGGA AAAAATTCAG CGAGAAAGAG
AAGGAACAAC TCGCCGAGAC GCTGCCGGAG ACCGCTGTCC ACACGAGCAA GCGCGAGCGG
GTGGCCATGG AGGCTGAGCG GGAAATCGTC GAACTGAAGA AGATGCAGTA CATGCGGGAC
AAGATCGGCG AGGAGTTCGA CGGCATCATT ACCGGCGTTG CAGCCTTCGG CTTTTTCGTC
GAGCTGGTGG AGCTGTTTAT CGAAGGGATG GTTCATATCT CGACGCTGAA ACAGGATTTC
TACCAGTACG TGGAGAAACA GCACTCCCTG ATCGGCGAGC AGAGCCGGAC GGTTTTCAGG
ATCGGCGACC GGGTGCGGGT CAGGGTGGCT GCCGTCAGCC TGGAAAAGAA GCAGATAGAA
TTCGTCCTTG CAGGGATGAA AGAAGCCGGT GCATTGAAGA CGGAAAGCTA TGCAGGCGAG
GAGTTCCCCA AGATCCCCGT CAGAGGGAAG TGGCCGACTG CTGGTAAGGG TGGCAAGAAG
ACGGGGAGCA CGAGCGGCGA TGACAAAGGG CGGAAGGCGA CACGGGGCAA ATCGGAACGA
AAACGGAGAT AA
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| Protein sequence | MKIGKDAVVK LLRSHAGVPM EFRELMQAFG INKAQRPQFK EIIDGFVEDG VLVRLKGRLY
VLPTETAGIV GKLTVHRDGY GFVIPEAGKE DIFIPARYLR ENMHGDKVEV RIVAKKRDGK
QEGRIVKTVE RGFTKIVGRF ESAREFGRVI PDEVRINRDI LIPIKASGKA QNGQVVVAEI
TSYPVAGKGL EGRIVEVLGW PDEPEVEVQT IIRKYDLPYI FPAEALSGAR AVSQSVTAAD
LEGRTDLRGR PTVTIDGETA RDFDDAVSVK REGKGNIRLW VSIADVSHYV KPGSPIDREA
YLRGTSVYFP DRCIPMLPEE LSNGICSLNP TVDRLTVTAE MLFGPSGEML QASFYPSVIK
SAARLTYTIV KNILVEKDQK LCEEYEDLVA DLKVMEELAL RLMTKRKKRG SIDFDLPEPE
ILLDMQGGTL AIIRAERNLA HKIIEECMLA ANEAVASHIE ERHIPSLYRV HETPDFAKLQ
DFREFVFNFG YELRLKEESV EPGEFQRLLD QAEGKPEERM INEVLLRCMK QARYSAENLG
HFGLAAASYT HFTSPIRRYP DLVVHRILKT LIGKKFSEKE KEQLAETLPE TAVHTSKRER
VAMEAEREIV ELKKMQYMRD KIGEEFDGII TGVAAFGFFV ELVELFIEGM VHISTLKQDF
YQYVEKQHSL IGEQSRTVFR IGDRVRVRVA AVSLEKKQIE FVLAGMKEAG ALKTESYAGE
EFPKIPVRGK WPTAGKGGKK TGSTSGDDKG RKATRGKSER KRR
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