| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_2583 |
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| Symbol | |
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| ID | 5163641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter uraniireducens Rf4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009483 |
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| Strand | - |
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| Start bp | 2988334 |
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| End bp | 2990523 |
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| Gene Length | 2190 bp |
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| Protein Length | 729 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640550080 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001231334 |
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| Protein GI | 148264628 |
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| COG category | [N] Cell motility
[R] General function prediction only
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF
[COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCTTC GTTCGGTTAA AGTGCTCTGC TTGTTGCTGC TGCTCACGCA GCTTTTTGCC
TGCAGCGGTC CGGAAGAAAA AAAGAAGAAA TTCTTCGATA AGGGGAAGGC TCTTTATGAA
AAGGGCGACT ATGTGAAGGC CAATCTTGAA TTCCGCAATG CCGTCCAGAT TGACCCGAAA
TTTGCGGATG CCTACTACAT GCTTGGTTTG GTTGAACTGA AGCGGAACAA CCTTAAGGGT
GCTTATGGCG GTTTCAACAA GGCCATCGAG CTCAATCCCC ATAATCTGGA CGCCCAGTAC
CAGATGGGAA AACTGTTCCT GGCGGTCAGG GAGGCGGACA AGGCGATGGA AAAGGCGGAG
TTGATACTAA AGGAAAATCC CCGCCACGAG GATGGTCAAC TATTGAAGGG GGCTGCGCTG
GTAGCCGGGA AGGAACTGGA CAAAGCCCGG CTCTACCTGG AGGAGGTTAT CGGCGGGGGG
GTGCGCAAGC CCGACGCATT TTTACTGCTT GCCTCAATTG CCCGATTGAA AGGGGATATG
TCCGGAACTG AAACGGCACT GCGGAAAGGG CTGGAAGCCA ACGGCGCATC TGTTGAGTTG
AATCTTGCCC TCGCCGAGCT GTATGCCGGG ACGAAGCGGT CCGGCGAGGC GGAAACCCTG
CTCCGGAAGG TTATCGTCCT TGAGCCGAAA AATATCAGCC ACAGCCTGAA CCTGGCAGGT
CTCTACTGGG CTTCCGGTAA TCGGGAGAAG GGGGAGTCGC TGCTGAAAAG TCTTGTAGCC
GGTGAGCCGA AGGATGAGGA GCGGCGGTTG CAGGTGGCTG CATTCTATCT GGGCAGAAAC
CTTCCCGATG ATGCCGAGCG TCTGCTGAAA GACGGCGTTG CGCAGATCGG AAAAAGCTTC
AAACTCCGCT TTGCGCTGAG TGATCTTTAT GCGGGCAGCG ACAGGGCGGA CCAGGCCATT
GTCTGTTTGA AGGAGTGTCT GACCCTGGAA AAGGATGCTA AAAATCCGGA GGTTATCCAG
GCAAAAAACG CCCTGGCCAA GATATACCTG GCCGGTCAGG ATCTGGTTGA AGCCGGGAAA
TATGTCGATG AGGTGATTAA GGCCAGTCCG AAGAACGTGG ACGGGCATTT CCTCAAAGGG
AGCATTGCCC TTTTGAAGAA TGACGGGGTT AATGCCGTTG CGGAATTTCG CACCGTTGTC
GCAGAGCAGC CCCAGTCCAT TCAGGGATAC CTGCGCCTGG CGGAGGCCCA TGCCCTGAAC
CGGGAGATGA ACTTGATGAA CGACACCCTG CAGAATGCGT TGAAGGTCGA TCCGGAATCA
AGCGATGTGC AGCGCGCCAT GGCCCGCAGT TACGCCATGC AAAAGGATTT CAGGAAGGCG
GAGGAGCAAC TGCGCAAGCT TGTCCGGAAA TACCCCGGCG ACATGGAAGC CAGAAGCGAC
CTCGGCGACG TATTTGTGGC AGCTCGTGAT TTCGGGCGAG CCGAATCGGA ATATGCCGAC
CTCAAGCGCA AAGTTCCCCA GATACCCCTT GCCTATGTGA AGCTGGGTGA ACTTTACATG
CTGGAAGGGA AATGGGCGAG GGGGGCAGCA GAGCTGGAAA AGGCCTTGCA GATCAACCCC
CGGGCAACCA GTTTCCTCTC TTCCCTGATG CAAGCCTATC TGCGCCTGAA CAAAGGGGAC
GCGGCCGTTG CGCTGCTCGA TGCCCGGATA CGCTCGAATC CGAAAGATGC TGTTGCCTAT
ACCTTGCTGG GACAACTCTA CGGTGCGCAG AAAAATCTGC CGAAGGCCGA TCAGGCATAC
AGCAAGGCGT TGGAGTTGAA GCCGGACCTA TGGACGGCCG CCAATGATCT GTCATTCCTC
CTCTGCGAAT ACGGCACGCC AAAGGACCTG GACAGGGCGC TCAGTCTGGC GCAAAAGGCT
CAGGCGATAC GCCCGGATGA TGCGACGGTG CTGGATACCC TCGGCTGGAT ATACTACAGG
AAAGGGGATA ACCGGAAAGC TGAGGAACAT CTCCGCAAAG CCCTGGCCAA GGGGAAAGAC
AATCCGGTGA TGAATTATCA TCTGGGGATG GTATCCCAAA AATCAGGCAA ACGCGACCTG
GCAAAGGAGT CCCTGGACAG GGCGCTGGCA GGTAAGGAAT GGTTTCCGGG CCGGGACGAG
GCAGTGAAAA CTTTGGCGCT GGTCAGGTAA
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| Protein sequence | MKLRSVKVLC LLLLLTQLFA CSGPEEKKKK FFDKGKALYE KGDYVKANLE FRNAVQIDPK
FADAYYMLGL VELKRNNLKG AYGGFNKAIE LNPHNLDAQY QMGKLFLAVR EADKAMEKAE
LILKENPRHE DGQLLKGAAL VAGKELDKAR LYLEEVIGGG VRKPDAFLLL ASIARLKGDM
SGTETALRKG LEANGASVEL NLALAELYAG TKRSGEAETL LRKVIVLEPK NISHSLNLAG
LYWASGNREK GESLLKSLVA GEPKDEERRL QVAAFYLGRN LPDDAERLLK DGVAQIGKSF
KLRFALSDLY AGSDRADQAI VCLKECLTLE KDAKNPEVIQ AKNALAKIYL AGQDLVEAGK
YVDEVIKASP KNVDGHFLKG SIALLKNDGV NAVAEFRTVV AEQPQSIQGY LRLAEAHALN
REMNLMNDTL QNALKVDPES SDVQRAMARS YAMQKDFRKA EEQLRKLVRK YPGDMEARSD
LGDVFVAARD FGRAESEYAD LKRKVPQIPL AYVKLGELYM LEGKWARGAA ELEKALQINP
RATSFLSSLM QAYLRLNKGD AAVALLDARI RSNPKDAVAY TLLGQLYGAQ KNLPKADQAY
SKALELKPDL WTAANDLSFL LCEYGTPKDL DRALSLAQKA QAIRPDDATV LDTLGWIYYR
KGDNRKAEEH LRKALAKGKD NPVMNYHLGM VSQKSGKRDL AKESLDRALA GKEWFPGRDE
AVKTLALVR
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