| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_2552 |
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| Symbol | |
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| ID | 5164031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter uraniireducens Rf4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009483 |
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| Strand | + |
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| Start bp | 2955047 |
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| End bp | 2956465 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640550048 |
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| Product | HlyD family type I secretion membrane fusion protein |
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| Protein accession | YP_001231303 |
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| Protein GI | 148264597 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGAGC AGCACCCACC AAAACCTTCC CGCTTGGCGA GGTTGTCCTC TTGGCTGTTC
AGTGCCGCCG AAACAGATTC GTTGGACTTT GCCCCTTCCA TGGTTCAATT ACAGGAGAAG
CCGCCGGCAC CGCTGGGACG GACCGTGTTG AAGGTTGTAG CGATACTGTT CTGTTGCGTC
CTGCTTTGGG CTGTTCTGGG GCGACTGGAT ATCGTGGCAG TTGCGGAAGG TAAGCTGGTA
CCGAAGACTT ACTTGAAGAT CGTGCAGCCT TCTGAACAGG GAATCGTGGA GGAGATCATG
GTCAAAGAGG GGCAGTCGGT TACCAAGGGG CAACTCCTGA TGCGGATGGA TGCGGTACTC
TCCACTGCGG AAGGAAAATC CCTGGCTTCG GAATTCCACC GTTTGCGGCT TGCCCTGCGC
CGGATCGATG CAGAACTGGC AGGCAGACCG CTTACCAGGG AGAGCAATGA CCCGCCTGAT
CTGTTCGCGC AGGTATCAGC ACAATATCAT ACCAACCGTC AGGCCCATCA GAGCGCCATT
GACGAGCAGC AAAGCGTACT GGAGCGCGCC AGCCAGGATA TGGCCTCTGC CCGGGAAATC
AAGGCAAAGC TTGAGCAGAC ACTCCCCCAT TACCGTGAGA TGGAAAAGGC CTACGAGGAT
CTTTTCAAAG TAGGAACAGT GGCAAAGCTT CAATTTTCAG AGAAGCAACG TGATCGCATT
GAGAAGGAAC ATGACCTTAA GACCCAGGAG TACACCCTAA AAAGCAATCA AGCACTGATG
GCCCAAACTC TGAAAAATAT GGCTCAGCTT ACTGCCGACA ACCGGCGACA GTTGCAGACA
GAACGAGTTG AGACAATGGG ACAGCTTGAG AAGATCACAC AGGAGTTGGC CAAGCAGCAG
CACCGTCACC AGCTGCTGGA ATTGAAGGCC TCCAACGACG GAGTTGTGAA GGATTTGGCA
ACACATACCG CCGGTACGGT GGTAACGCCG GGGACAATCC TGATGACCCT GGTACCGAAG
GAAGAACCGC TGCAGGCTGA GGTATGGGTT AGCAACGAAG ATATCGGCTT CGTGCGTCCT
GATCAACCGG TGAAGGTCAA ACTTTCTGCC TTTAGCTTCC AGAAATACGG CATGTTGGAC
GGAAAAGTGG AGCAGGTCAG TGCCGATTCC AGCGAAAATC CAAACCAGAG CGGAACGATC
GATTCGACCA CGTCAGTTCC CCCCAGGGAC CTAAGCCGAC TGCGCTACAA AACCCTGATC
GCTCTTTCCA CCCAGCAACT CATTGCCGAC GGACAGAAGC ACAAATTGAC ACCGGGCATG
CAGGTATCGG CGGAGATCAA GCTCGGTACG AGATCGGTGG TGGAATATCT GTTCTCGCCG
GTGACGAAGG CCTTCCATGA AGCGGGGCGA GAGCGGTAA
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| Protein sequence | MNEQHPPKPS RLARLSSWLF SAAETDSLDF APSMVQLQEK PPAPLGRTVL KVVAILFCCV
LLWAVLGRLD IVAVAEGKLV PKTYLKIVQP SEQGIVEEIM VKEGQSVTKG QLLMRMDAVL
STAEGKSLAS EFHRLRLALR RIDAELAGRP LTRESNDPPD LFAQVSAQYH TNRQAHQSAI
DEQQSVLERA SQDMASAREI KAKLEQTLPH YREMEKAYED LFKVGTVAKL QFSEKQRDRI
EKEHDLKTQE YTLKSNQALM AQTLKNMAQL TADNRRQLQT ERVETMGQLE KITQELAKQQ
HRHQLLELKA SNDGVVKDLA THTAGTVVTP GTILMTLVPK EEPLQAEVWV SNEDIGFVRP
DQPVKVKLSA FSFQKYGMLD GKVEQVSADS SENPNQSGTI DSTTSVPPRD LSRLRYKTLI
ALSTQQLIAD GQKHKLTPGM QVSAEIKLGT RSVVEYLFSP VTKAFHEAGR ER
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