| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_2505 |
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| Symbol | |
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| ID | 5165485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter uraniireducens Rf4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009483 |
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| Strand | - |
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| Start bp | 2892917 |
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| End bp | 2893636 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640550001 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001231256 |
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| Protein GI | 148264550 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000000824724 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCGAAA GATTGCAAAA AATATTATCC CAGGCGGGGA TTGCCTCGCG CCGGGAGGCG
GAACGGATCA TCACCGACGG GCGGGTCGCT GTCAACGGTC AGGTGGTGAC GGAGTTGGGG
ACGAAAGCGG ATGCGGAAAA GGACCGTATA ACGGTTGACG GCAGGCCGAT CAGGGTGGAA
GCGAATAAGC TCTACGTCCT TTTGTACAAG CCGGTCGGCT ACATGACCAC CATGAAAGAT
CCCGAGGGGC GTCCTATCGT CACCGACCTG CTGAAAGGGA TCAAGGAGCG GGTCTATCCA
GTCGGGCGGC TTGACTACAA TACGGAAGGG CTGCTGCTAT TGACCAATGA CGGCGCGCTG
GCAAACAGGC TTGCCCATCC GAGCCATGAG GTGGACAAGG GGTATCTGGT CCGGGTCAGG
GGCAAGGTGA CACCGGCACA GTTGAAGCAC CTGGCTGTCG GAGTTGATCT TGAGGACGGC
AGGACAGCGC CGGCGGTGGT TTCACTGGTG CGGGAGAGTG AACAGAATTG CTGGATTTCC
ATTACCATTC ACGAGGGGCG TTATCGGCAG GTGCGTCGCA TGTGTGAAGC GGTGGGGTTG
ACGGTGGTTC GGCTGAAGAG GTCCCGTTAT GGTTTTCTGG AAATCGGCGA ACTGAAACCT
GGCGAATACC GACTGTTGAC GCCGGCAGAG GTTGAGCGTC TGCAAAGAGG GGAACGCTGA
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| Protein sequence | MLERLQKILS QAGIASRREA ERIITDGRVA VNGQVVTELG TKADAEKDRI TVDGRPIRVE
ANKLYVLLYK PVGYMTTMKD PEGRPIVTDL LKGIKERVYP VGRLDYNTEG LLLLTNDGAL
ANRLAHPSHE VDKGYLVRVR GKVTPAQLKH LAVGVDLEDG RTAPAVVSLV RESEQNCWIS
ITIHEGRYRQ VRRMCEAVGL TVVRLKRSRY GFLEIGELKP GEYRLLTPAE VERLQRGER
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