| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_2486 |
|---|
| Symbol | |
|---|
| ID | 5165135 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | - |
|---|
| Start bp | 2875646 |
|---|
| End bp | 2876242 |
|---|
| Gene Length | 597 bp |
|---|
| Protein Length | 198 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640549982 |
|---|
| Product | lytic transglycosylase, catalytic |
|---|
| Protein accession | YP_001231237 |
|---|
| Protein GI | 148264531 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00000427479 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAC AACTGTTGAT GTGCTATGCC ATGTTGTTGG TTACTTTCAC TGCTATTTCG
TCTTTTGCAG ACATATACAA GTACGAAGAT GAAGAAGGGG TTCTGCATTT CACCGATGCC
CCGACCGACA AGCGCTTTAA AGTATTTATG CGTGATCTGA AAAAGGACAG GAAACTTCGT
ACCACGTTCA GACTCGCCGG ATGTGCAAGA AATCCGGAAG AATTCGAACC GATAATCAAC
GCCTGCGCCC TCGAATACGG TGTGGATAAA TCACTGGTCA AGGCTGTCAT CCACGCGGAG
TCCGGATATA ACCCGACTGC CGTTTCCCCC AAAGGGGCCA GAGGTCTCAT GCAACTCATG
CCGAAAACAG CCCAGGACCT GAAGGTGACC AACTCTCTCG ATCCAGCCGA GAATATTCGC
GGTGGGGTGC GTTATTTAAA ATTTCTTCTT AATACCTTTA AGGGTGATGA AGCGCTGGCC
CTGGCAGCAT ATAATTCCGG TCTCAGCAAG GTAGCCAAAT TCGGGGGAGT TCCTCCCTAC
GAAGAAACCC GCAATTACGT TGCCAAGGTG CTGAATTACA AGAAAAACTA CAAATAA
|
|---|
| Protein sequence | MKKQLLMCYA MLLVTFTAIS SFADIYKYED EEGVLHFTDA PTDKRFKVFM RDLKKDRKLR
TTFRLAGCAR NPEEFEPIIN ACALEYGVDK SLVKAVIHAE SGYNPTAVSP KGARGLMQLM
PKTAQDLKVT NSLDPAENIR GGVRYLKFLL NTFKGDEALA LAAYNSGLSK VAKFGGVPPY
EETRNYVAKV LNYKKNYK
|
|---|
| |