| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_2386 |
|---|
| Symbol | |
|---|
| ID | 5163828 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | - |
|---|
| Start bp | 2765789 |
|---|
| End bp | 2768407 |
|---|
| Gene Length | 2619 bp |
|---|
| Protein Length | 872 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640549882 |
|---|
| Product | DNA mismatch repair protein MutS |
|---|
| Protein accession | YP_001231138 |
|---|
| Protein GI | 148264432 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
|---|
| TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.143678 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCAAC TCACACCAAT GATGCGTCAG TACCTGGAGA TAAAAGCCGG CTATCCCGAT
GCAATTCTCT TTTTCCGCCT TGGCGACTTC TACGAGATGT TTCTCGATGA TGCGGTAAAA
GCTTCGCGTA TCCTTGACAT CACCCTTACT TCCCGCAATA AAAACTCCGA TGGCGCAGAT
GTCCCGCTCT GCGGCATACC TTATCATTCC GCTACCCCCT ATATTGCGAA ACTGATTGAA
GCCGGCGAAA AGGTCGCGAT CTGCGAGCAG GTTGAAGATC CCAAGAGCGT CAAAGGGATT
GTCAGGCGTG AAGTGGTGAA GGTGATCACC CCCGGCCTGG TTGTCGACAG CTCGAACCTG
TCGCCGAAGG AGAACAACTA CCTCCTCTCC CTCTACTGTG ACGACGCCAC GACCTGGGGG
CTCTCCTACC TGGACCTTTC CACCGGCGAG TTCAGGGTTA CCGAATTGGA TGGTTTTGAT
GCGGCCGTTG CCGAGGTGGC GTGCGTGAAG CCGCGGGAAA TCATCCTGCC GGCTGTTTTT
CGTGAAAACG GGCGCATGAA GGAGTTGATG CCGGTCACAG CCGGGCTTGC CACGACCTTT
GTCGACGACT GGGTTTATGA CCTCGATTAC TGCAAGCGGC TGATAGGCAG CCATTTCGGC
GGCGCCTCAC CCTCTGCCCT TGGATGCGAT GGTTTAAACA CCGGATTATA TGCGATCTGC
GCGGTTCTTC ACTATCTCCA GGAGACCCAG AAGGGCCGGG CCGGGCACGT CAATTCGATC
ATTCCTTATA CGAACAGGGA GTATCTGGTT CTGGACGAGT CGACGAGGAG AAACCTGGAG
CTGACCGCTA CCCTTGCGGA GGGGAAGCGT AAGGGGTCGC TGCTCGGTCT CATGGATCGT
ACCACCACTG CCATGGGTGG ACGCAAGATG AAGCAGTGGA TTAACTATCC ACTGGTAACC
ATTCAGAGTA TAACGGAACG TCAGGATGCG ATCGAGGAGT TTGTACAAGA TCCTTCCCGC
CGCACAGCAC TTGTTTTCCT GTTGAACGGC GTCTATGACC TGGAACGGTT GAACGGCAGG
ATCAGTCTTG CCAGTGCCGG CGCCAAGGAT CTGGTTGCAA TGAAAGAGTC GCTGGCGAGG
ATTCCCGGCA TTAAGGAGCT GTTGGCTTCT TCTTCGTCTG TTCTCCTGCG CAGACTGAAC
GAGGGGCTCA ACCCGTTGCC GGATCTGGTG GGGCTCATTG CAGGCGGTAT CGTCGAGAAC
CCGCCGTTCG TCCTGAGGGA TGGCGGGATC ATCGCCGACG GTTACAACGC GGAACTGGAT
GAACTGCGGG CCATCAGCCG TGAAGGGAAG GGGTTCATCG CCCGTCTGGA GGCGCAGGAA
AAAGGGCGTA CCGGTATAAA CTCCCTGAAA ATCCGTTATA ACAAGGTCTT CGGTTATTAC
ATCGAAGTGA CCAAGACGAA CCTGACTTCA ATCCCTGCCG ATTACATACG CAAGCAGACC
CTGGCCAATG CCGAGCGCTA TATCACCCCG GAGCTGAAAG AATACGAAGA CAAGGTCCTC
GGTGCGGAAG ATCGTATCAG GGAACTGGAA TTTTCTCTTT TTCAGGAAAT CCGCGAGACG
GTCACCGGCC ATGGCGAAAT CGTCGCCCGT ACCGCCGATT GTCTGGCGAC ACTGGACGTG
CTTGCTTCTC TGGCTGAACT GGCCCATGAG CGCAATTACT GCCGACCGCT AGTCGATGAC
GGTACTACCC TCTTCATCAG TGAGGGGAGG CATCCGGTCA TCGAGGCGAT GCACCAGGGG
GAACGATTCG TTCCCAACGA CACCTTGCTT GATAACGGGG AGAACCAGCT CATCATCATA
ACCGGACCGA ACATGGCCGG CAAGTCGACA TTTATGCGTC AGGTGGCGTT GATCACCCTT
ATGGCGCAGA TGGGGAGTTT CGTCCCGGCA ACAGAGGCCC ATATCAGCCT GGTGGACCGC
ATATTCACCC GGGTTGGCGC CTCCGATAAC CTTGCACGCG GGCAGTCCAC CTTCATGGTG
GAGATGATGG AAAGCGCCAA CATTCTGCGT CATGCAACGC CCAAAAGCCT CGTGATCCTC
GACGAGATCG GCCGCGGCAC CTCCACATTT GACGGTGTTT CCATTGCCTG GGCAGTTGCC
GAATTTCTTC ATGATAACGA CAAACATGCC GCCAAAACCC TCTTCGCCAC CCATTACCAT
GAATTGACCG AACTTGCGGT GACGCGCAAG CGGATCAAAA ATTTCAACAT CGCAGTAAAG
GAATGGAACG AGCAGATCAT TTTTCTCCGC AAGATAGTGT CCGGTGGCGC ATCCCATTCT
TACGGCATTC AGGTGGCACG GCTGGCAGGT CTTCCCCTTG AAGTCATCGA GCGGGCAAAG
GAGATTTTAC AGAATCTCGA AAAGGGGGAG TTCGCTGAAG AGGGCATTCC CCGCATCGCC
CGCGGCAAAA AGAGCGCTGG TTCGGCACCC GCTTCGCAGT TGTCGTTGTT TGACAGCGGA
GAAGATATGC TGCGAAAAAG GTTGAAAGGT ATGGATGTGA CTACGCTTAC CCCGCTGGAA
GCCCTGAATC TGCTGGATGA ATTAAAAAGG ATGGTTTGA
|
|---|
| Protein sequence | MSQLTPMMRQ YLEIKAGYPD AILFFRLGDF YEMFLDDAVK ASRILDITLT SRNKNSDGAD
VPLCGIPYHS ATPYIAKLIE AGEKVAICEQ VEDPKSVKGI VRREVVKVIT PGLVVDSSNL
SPKENNYLLS LYCDDATTWG LSYLDLSTGE FRVTELDGFD AAVAEVACVK PREIILPAVF
RENGRMKELM PVTAGLATTF VDDWVYDLDY CKRLIGSHFG GASPSALGCD GLNTGLYAIC
AVLHYLQETQ KGRAGHVNSI IPYTNREYLV LDESTRRNLE LTATLAEGKR KGSLLGLMDR
TTTAMGGRKM KQWINYPLVT IQSITERQDA IEEFVQDPSR RTALVFLLNG VYDLERLNGR
ISLASAGAKD LVAMKESLAR IPGIKELLAS SSSVLLRRLN EGLNPLPDLV GLIAGGIVEN
PPFVLRDGGI IADGYNAELD ELRAISREGK GFIARLEAQE KGRTGINSLK IRYNKVFGYY
IEVTKTNLTS IPADYIRKQT LANAERYITP ELKEYEDKVL GAEDRIRELE FSLFQEIRET
VTGHGEIVAR TADCLATLDV LASLAELAHE RNYCRPLVDD GTTLFISEGR HPVIEAMHQG
ERFVPNDTLL DNGENQLIII TGPNMAGKST FMRQVALITL MAQMGSFVPA TEAHISLVDR
IFTRVGASDN LARGQSTFMV EMMESANILR HATPKSLVIL DEIGRGTSTF DGVSIAWAVA
EFLHDNDKHA AKTLFATHYH ELTELAVTRK RIKNFNIAVK EWNEQIIFLR KIVSGGASHS
YGIQVARLAG LPLEVIERAK EILQNLEKGE FAEEGIPRIA RGKKSAGSAP ASQLSLFDSG
EDMLRKRLKG MDVTTLTPLE ALNLLDELKR MV
|
|---|
| |