| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_2364 |
|---|
| Symbol | |
|---|
| ID | 5166487 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | - |
|---|
| Start bp | 2734589 |
|---|
| End bp | 2736112 |
|---|
| Gene Length | 1524 bp |
|---|
| Protein Length | 507 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640549860 |
|---|
| Product | lipopolysaccharide biosynthesis protein |
|---|
| Protein accession | YP_001231116 |
|---|
| Protein GI | 148264410 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
|---|
| TIGRFAM ID | [TIGR03007] polysaccharide chain length determinant protein, PEP-CTERM locus subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAACTA CAAATGAGTT GGATTATAAA AAATACTTGA TGTTGATTGA TAAAAAAAAG
AAGCTATTCA TAATAACAGC ACTTGCAATT ATGACAGTAA TTACAATTGT AAGTTATTTT
TTGCCAAGAA AATACGAGGC CAAAAGTACT GTTTTTATAG AAAAAAGCGT AATCAGTGAT
CTTGTTAAAG GGATTGCAAT AACACCATCA ATGGACGAAA AAATAAAAGT CCTGAACTAT
GCAATAACCA GCCGCACGCT TTTGCTCAAG GTTATTGACG ATCTTGATCT GAATGTCAAC
AAGCAGAATG ATGCACAACT GGAAGAGTTG GTTGCCAAGT TTCAAAAAAA TACAGTTATA
AAACTAAAAA ATGACGAGAA TTTCTTCATA ATCTCATTTA CCAATGAAAA TCCGCGACTG
GCGCGTGACT ATGTTAATAC CCTTGTCAGA CGTTACATCG AAGAAAATGT TTCTTCAAAA
AGGGAAGAAT CCTATGGTGC GACAAAATTT CTATCTGAAC AGATTGAAGT GTATAAGGAG
AAAATGGACA AAGCCGAGGC GGAAGTAAAT AACTTCAAGA TAGGCAAGAT GGGTGTCATT
GCAACTGATC CGGCGACCCT TCAGAAAGAG ATCAATGATG CTCAGCAAAA AATCGACGAC
ATGCGGTTAA AGCGGGCACA GCTTGAATCA TTACGTATTC AGATCAAAAA AAACAATCCT
CTGCAACAAA AAATGCTGTC ATTACAAAAA AAGCTGGATG AAATGCTTGT CGAGTACACA
GAGAGTTACC CCGAAGTAAT CAGGGTGAAA ACCGAGTTAC AGGCGGTAAA AGAGCAGTTA
CGCAACAGAA ACACGGGTTT CGATATGTCT CCTGCCGAAA CTCCTGATTT AGACAGGGTT
GAAGCCGAAT TGAAGGCGCT GAAGGCGGCT GAAGCAAATC AGTATGTTAT TATCTCGTCC
ACCCGTTCGC TGTTGCACAA CATCCCTGTG GCAAAGGCGA CATTAGAACA ACTGGAAAGA
GATAAGAACA ATCAAAAAAA CCTTTACGAA CAGCTTGTCA CCAGGCATGG CCAATCTGAG
GTTTCCAAGC AGATGGAAGT CCAGGACAAG GCTACAACCT TTAGAATCGT TGACCCTGCT
ATTATGCCGA TTAATCCGGT CAGCCCGAAC AGGGTCAATA TCATCCTCAT GGGGATAGGT
GCAGGACTGG TCATCGCATT CTGTCTCCTG ATGCTTTTGG ATTATCTCGA TCAATCGGTA
AAAAACGTGG ACGCCCTCAA ATCCTTTGGT CTACCGATTC TTGCAATCAT TCCCAAAATG
CAGAACCCGG TTGAGCTCCT GTTGCAGAAA AAAAAGAATG TGAAGCTGTA CGTGATTGCG
AGTGTCTATT TTTCCCTCAT CCTCACAGTC TTGCTGTTAG AGGTATTAAA CAGCTCATTA
TCCAATACTT TCATTGATTC TATTGAGATT AAACAGTATC TGCCTGATCT TATGAGTCAA
ATTAAATATC ATGGCGGCAA TTAA
|
|---|
| Protein sequence | MSTTNELDYK KYLMLIDKKK KLFIITALAI MTVITIVSYF LPRKYEAKST VFIEKSVISD
LVKGIAITPS MDEKIKVLNY AITSRTLLLK VIDDLDLNVN KQNDAQLEEL VAKFQKNTVI
KLKNDENFFI ISFTNENPRL ARDYVNTLVR RYIEENVSSK REESYGATKF LSEQIEVYKE
KMDKAEAEVN NFKIGKMGVI ATDPATLQKE INDAQQKIDD MRLKRAQLES LRIQIKKNNP
LQQKMLSLQK KLDEMLVEYT ESYPEVIRVK TELQAVKEQL RNRNTGFDMS PAETPDLDRV
EAELKALKAA EANQYVIISS TRSLLHNIPV AKATLEQLER DKNNQKNLYE QLVTRHGQSE
VSKQMEVQDK ATTFRIVDPA IMPINPVSPN RVNIILMGIG AGLVIAFCLL MLLDYLDQSV
KNVDALKSFG LPILAIIPKM QNPVELLLQK KKNVKLYVIA SVYFSLILTV LLLEVLNSSL
SNTFIDSIEI KQYLPDLMSQ IKYHGGN
|
|---|
| |