| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_2135 |
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| Symbol | |
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| ID | 5164474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter uraniireducens Rf4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009483 |
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| Strand | - |
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| Start bp | 2492571 |
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| End bp | 2494322 |
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| Gene Length | 1752 bp |
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| Protein Length | 583 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640549631 |
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| Product | thiamine pyrophosphate binding domain-containing protein |
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| Protein accession | YP_001230896 |
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| Protein GI | 148264190 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits |
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| TIGRFAM ID | [TIGR03336] indolepyruvate ferredoxin oxidoreductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00067173 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGAAA TTCTTTCCGG CAACGAAGCC ATCGCCCGCG GCGCCTTTGA AGCAGGGGTA
AAGGTGGCCA GCGCCTATCC CGGTACTCCA TCAACAGAAA TCCTTGAGAA TATCATTCAA
TATAAGGATA TCGACGCGTC TTGGGCTCCA AATGAGAAAG TAGCGCTTGA GGTAGGGATT
GGCGCTTCTT TTGGCGGTGG CCGAGCATTG GTCACCATGA AACATGTGGG GGTCAATGTT
GCTGCCGACC CACTCTTTAC CCTTTCCTAT ACCGGTGTCA ATGGCGGATT GGTCCTTGTC
AGCGCTGACG ATCCGGAAAT GCACTCCTCG CAAAATGAGC AGGACAACCG CAACTACGCC
AAATTCGCCA AAGTGCCGAT GCTGGAATCT GCTGATTCCC AGGAATGTAA AGATTTCACC
AAACTTGCAT TCGCCATTTC CGAACAGTTT GACACACCGG TCATGCTCCG TACCACAACC
CGCACCTCCC ATGGTAAGTC CATCGTCACA CTGGAAGAAC CGGTTGCCGG CTTACCGGTA
CCCAAGTTGA CGAGAAATGC TGCAAAATTC GTCATGCTCC CGAGCAATGC GAGGGTCCGT
CACCCTTTTA TCGAGGAACG CACACTCAAA CTGCAGCAGT ATGCCAATAC GCTCACCATT
AATCGGATGG AACTGAGGGA CAGGTCAATC GGCGTCATTA CCTCCGGTAT CCCTTATCAG
TATGTGCGAG AGGTGCTGCC GGAAGCATCG GTGTTAAAGC TCGGCATGGT TTATCCGTTG
CCGGACAAGT TGATCCGTGA ATTTGCCGGG AAGGTTGAAA AGCTATATAT TGTCGAAGAG
CTTGACCCCT TTATCGAAGA ACAGGTAAAG GCAATGGGGG TCGAGGTGAT CGGCAAGGAG
ATCATCCCGA TCTGCGGTGA GCTGACCCCG GGGATCCTGC GTAAAGCCTT CAAACTGCCG
GAACCGGCAC GATCCAGGGT TGACATCCTT CCGGGCAGAC CGCCCAACAT GTGCCCTGGA
TGCCCTCATC GCGGTATTTT CTATACCCTG AACCAGCTCA AGGCTTACGT AATGGGCGAT
ATCGGCTGCT ACACCCTCGG CTTCCTTCCG CCGCTTTCTG CAATGGACAC CTGCGTATGC
ATGGGGGCCG GCATCGGCAA CGCCATCGGA ATCACCAAGG TGCTTTCCAC TGAAGAACAG
AAAAAGGTCG TTGCCGTTAT CGGCGACTCC ACCTTCCTCC ATTCGGGGAT TACCGGGCTT
TTGGACATGG TTTATAACAA CGTGCCCGCT ACGGTGATAA TCCTTGATAA CCGCATAACC
GCCATGACCG GCAGACAGGA AAATCCGGCA TCCGGCTTTA CCCTGGTGGG AGATGAGACT
TTTAAAGTCG ATCTGCCGCA ACTGGTGAGG TCGTTGGGTG TTAAAAATGT ACGGATTGTC
GATCCGTTAA ACATCGACGA AACGAAGCAG GTTCTTCAGG AGGAAATGGA ACGTCCTGAA
CCGTCAGTCG TCATTACACG GCGTCCCTGT GTACTTATCA AGCGGGAAGG GGTTTACGAG
AATGGCGCTG GGGTTAAGGT TGACATTGAA CTCTGCGCAG GCTGCAAGGC CTGTTTGAAA
CTGGGATGTC CGGCCATTAT CTGGCAGGCG GATGGGAAAA AGGGAAAGGC ATTTATCGAC
CCACAGCTCT GCACGGGCTG CAATGTCTGT GAGCAGGTCT GTAAACTTAA CGCAATTGAG
GCAAAAAAAT GA
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| Protein sequence | MKEILSGNEA IARGAFEAGV KVASAYPGTP STEILENIIQ YKDIDASWAP NEKVALEVGI
GASFGGGRAL VTMKHVGVNV AADPLFTLSY TGVNGGLVLV SADDPEMHSS QNEQDNRNYA
KFAKVPMLES ADSQECKDFT KLAFAISEQF DTPVMLRTTT RTSHGKSIVT LEEPVAGLPV
PKLTRNAAKF VMLPSNARVR HPFIEERTLK LQQYANTLTI NRMELRDRSI GVITSGIPYQ
YVREVLPEAS VLKLGMVYPL PDKLIREFAG KVEKLYIVEE LDPFIEEQVK AMGVEVIGKE
IIPICGELTP GILRKAFKLP EPARSRVDIL PGRPPNMCPG CPHRGIFYTL NQLKAYVMGD
IGCYTLGFLP PLSAMDTCVC MGAGIGNAIG ITKVLSTEEQ KKVVAVIGDS TFLHSGITGL
LDMVYNNVPA TVIILDNRIT AMTGRQENPA SGFTLVGDET FKVDLPQLVR SLGVKNVRIV
DPLNIDETKQ VLQEEMERPE PSVVITRRPC VLIKREGVYE NGAGVKVDIE LCAGCKACLK
LGCPAIIWQA DGKKGKAFID PQLCTGCNVC EQVCKLNAIE AKK
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