| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_2131 |
|---|
| Symbol | |
|---|
| ID | 5164455 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | - |
|---|
| Start bp | 2489003 |
|---|
| End bp | 2490142 |
|---|
| Gene Length | 1140 bp |
|---|
| Protein Length | 379 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640549627 |
|---|
| Product | extracellular ligand-binding receptor |
|---|
| Protein accession | YP_001230892 |
|---|
| Protein GI | 148264186 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0617424 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGAAAA TCGTATTATT CGCACTGGGC ATTGTAATGA TGTTTTCCGT AACTTCGGCG
CTGGCTGCTC CCGCCATAAG AATCGGGGCA CTGTTTTCGG TCACCGGTCC GGCCTCTTTT
CTTGGCGAGC CTGAGAAAAG CACCCTTGAG ATGCTGGTAA AAGAAATCAA TGCAAAAGGT
GGAATCAAGG GGAGCAAGAT TGAACTGGTG GTCTACGATA CCCAGGGAGA TGCAACCAAG
GCTGTTCAAC TGGCCAACAA ACTTATCAAG AACGACAAGG TTGTGGCGAT TATCGGGCCG
AGCACAACGG GTGAAACCAT GGCCGTAATA CCGATCGTGG AAAAGGAACA GATTCCTCTC
ATATCCTGTG CCGCCGGTAT CAAGATAACC AATCCGGTAA AAAGATGGGT GTTCAAGACA
CCGGCCAACG ACCATGTTGC TGCCGAGAAA ATTCTCAATT TTGCGGAGAA ACGCAAGCAG
AAAAGCATAG CCCTATTGAC CGTTTCCGAT TCTTTCGGCT CTTCCGGACG CGAACAACTG
AAAGAAATGG CGTCCAGGAA GGGCTTCAAA ATAGTCGCCG ACGAGGTCTA TTCACCGAAA
GACACCGACA TGACGGCGCA ACTCACCAAG ATCAAGGGAG CCAAGCCCGA TGCGATAATC
TGCTGGGGAA CCAACCCCGG TCCTGCGGTA ATAACCAGAA ACCTGAAGCA ACTGGGCATG
AAGATACCTC TCTACCAGAG TCACGGCGTC GCATCAAAGA AATTCATCGA ACTGGCCGGG
GCTGATGCCG CAGAAGGAGT AATACTCCCT GCCGGCAAAC TGGCAATATA TGAGCTGTTG
AAGAAAACCG ACCCACAGCA TAAGCTCCTC AAGGAGTATG ATCAGGCGTA CAGGAAGGCA
TACGGGGTGG AAGCATCCAC ATTTGGTGGT TATGCATATG ACGGATTCCA GCTGTTAATC
AATGCCATCA AGAAGTCCGG GGCAACGCCG GGGCAGATCA GAAACGGCAT CGAGCAGAGC
ACCAGGATGG TAGGAGTTTC CGGCGTATTC AACATGTCAA CCAATGACCA TAACGGCTTG
GATCTTTCCG CGTTCGAAAT GGTACGTATC GTAAAAGGTG ATTGGACGTT AGCGCGCTGA
|
|---|
| Protein sequence | MRKIVLFALG IVMMFSVTSA LAAPAIRIGA LFSVTGPASF LGEPEKSTLE MLVKEINAKG
GIKGSKIELV VYDTQGDATK AVQLANKLIK NDKVVAIIGP STTGETMAVI PIVEKEQIPL
ISCAAGIKIT NPVKRWVFKT PANDHVAAEK ILNFAEKRKQ KSIALLTVSD SFGSSGREQL
KEMASRKGFK IVADEVYSPK DTDMTAQLTK IKGAKPDAII CWGTNPGPAV ITRNLKQLGM
KIPLYQSHGV ASKKFIELAG ADAAEGVILP AGKLAIYELL KKTDPQHKLL KEYDQAYRKA
YGVEASTFGG YAYDGFQLLI NAIKKSGATP GQIRNGIEQS TRMVGVSGVF NMSTNDHNGL
DLSAFEMVRI VKGDWTLAR
|
|---|
| |