| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_2116 |
|---|
| Symbol | |
|---|
| ID | 5166291 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | + |
|---|
| Start bp | 2472862 |
|---|
| End bp | 2474280 |
|---|
| Gene Length | 1419 bp |
|---|
| Protein Length | 472 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640549612 |
|---|
| Product | two component, sigma-54 specific, Fis family transcriptional regulator |
|---|
| Protein accession | YP_001230877 |
|---|
| Protein GI | 148264171 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.570113 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGAGA CTGTATATCC CGATTTCGGC ATACTTCTGG TCGACGACGA ACCGGACTGG
CTCGGCTCTC TTGCCCTGAC CCTGGAGTCC TGCGCGGGAA TCTGCAACAT CGCGACCTGC
TGCGACAGCC GCCAGGTCAT GGCCATACTC GATGAAGGGC GCATCGGCCT TGTCCTGCTC
GACCTGACCA TGCCGCACCT GTCGGGTGAG GATCTGCTGG AACTGATTGC CGAACGGCAT
CCCGAAATCA CCGTCATCGT CGTCAGCGGC CTGAACCAGG TCGAGACCGC CGTCCGCTGC
ATGAAGCGCG GCGCGTTCGA CTATTTCGTC AAGACCGACG ACGAGGACCG GATGATCGGC
GGAGTGCTCC GGGGTGTGCA CATGCAGGAG CTTCAACGGG ATCACCGGGA AATGGCCAGC
CGCTTCTGTT CGCCCGAAAT CCGGCATCCC GAGGTTTTCG ACGCCATCGT CACGGGCGAT
CGGGCCATGC AGGCCATATT CGCCTATGTG GAAGCTGTGG CCAAGAGCCC GCAGCCGCTG
CTGATAACTG GCGAGAGTGG CGTCGGCAAG GAACTCATCG CCCGCGCCGC CCACAGGCTG
AGCGGCTGCC GGGGAAAGCT GGTGACGGTG AACGTGGCCG GGCTCGACGA CACGGTCTTT
GCCGATACCC TGTTCGGTCA CGTGCGGGGC GCCTTTACCG GCGCCGAACA GGTACGGCGC
GGTATGGTGG AGGAAGCAGC CGACGGCACC CTTTTTCTGG ACGAGATCGG CGATCTGAGC
ATCTCCTCCC AGGTGAAACT CCTGCGACTG CTTCAGGAGG GGGAATATTT CCCGCTCGGC
AGCGACCTGC CCAAGCGCCT CAAGGCCCGG GTCATCGTCG CCACCCATCA GAACCTGTCG
GCCAAGGAGG GGACGGGCGC ATTCCGCCGT GATCTCTACT TCCGCCTCCG CACCCACCAC
GTCCATGTGC CGCCGCTCCG GGAAAGGAGA GGGGACATTC CCCTGCTGCT GGATCATTTC
CTGGAAGAGG CGGCCCGGGC ACTGGGCAAG AAAAAGCCGA CCCCGCCAAA GGGTCTGGCC
CAGTTTCTCG CCACCTATGG CTTCCCCGGC AATGTCCGCG AACTCAAGGC CATGGTCTAT
GATGCCGTCA GTGTGCACCG CGACCGCATG CTCTCCATGG ACTCCTTTGT CAAGGCCGTG
GAGCGTTCCC AGGCAGAGGC CGGTCCAGCC GCTGTTACCC CTCCCAAAGA AAACCCCTTC
GCCGGGTTCG ACGAACTCCC CACCTTCAGC GATGCCGCTG CATTCCTGGT GATGGAGGCC
ATGAACCGCG CCAACGGTAA CCAGACCCTG GCTGCGCGCC TGTTGGGCAT ATCCCAGCCG
GCGCTCTCCA AGCGATTGAA GATGCGGCAA TCTATTTGA
|
|---|
| Protein sequence | MSETVYPDFG ILLVDDEPDW LGSLALTLES CAGICNIATC CDSRQVMAIL DEGRIGLVLL
DLTMPHLSGE DLLELIAERH PEITVIVVSG LNQVETAVRC MKRGAFDYFV KTDDEDRMIG
GVLRGVHMQE LQRDHREMAS RFCSPEIRHP EVFDAIVTGD RAMQAIFAYV EAVAKSPQPL
LITGESGVGK ELIARAAHRL SGCRGKLVTV NVAGLDDTVF ADTLFGHVRG AFTGAEQVRR
GMVEEAADGT LFLDEIGDLS ISSQVKLLRL LQEGEYFPLG SDLPKRLKAR VIVATHQNLS
AKEGTGAFRR DLYFRLRTHH VHVPPLRERR GDIPLLLDHF LEEAARALGK KKPTPPKGLA
QFLATYGFPG NVRELKAMVY DAVSVHRDRM LSMDSFVKAV ERSQAEAGPA AVTPPKENPF
AGFDELPTFS DAAAFLVMEA MNRANGNQTL AARLLGISQP ALSKRLKMRQ SI
|
|---|
| |