| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_2055 |
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| Symbol | |
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| ID | 5165698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter uraniireducens Rf4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009483 |
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| Strand | - |
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| Start bp | 2405194 |
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| End bp | 2406969 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640549550 |
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| Product | pepF/M3 family oligoendopeptidase |
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| Protein accession | YP_001230818 |
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| Protein GI | 148264112 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1164] Oligoendopeptidase F |
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| TIGRFAM ID | [TIGR02290] oligoendopeptidase, pepF/M3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00862679 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGATACG ATATAAAAGA TCTGTTGTGG AACACCGCCC CCCTCTATAC CGGACCTGAG
TCACCGGACC TGGAAGGTGA TTTTGAAGCA GCAGCAACAG GAGCGAATGG GTTCAGGGAA
CGCTACCGGG GGCGTGTCGC GGGCTTGGAT GTCGTTGAAC TGCAAAAGGC GCTGGTCGAA
TACGAAGAGC TCGAAGAACT AATCGTCAAA CCGCAGCTCT ATGCCCATCT CCTCTTTGCC
GCTGACTCGG AAAACGACGT CAACAAGCGC CTCTCTCAAA AGGCAGCGGA ATTCGGCAAC
CTGATGAGCA GGGAACTCCT GTTCTTCGAC CTGGAGATCA TCCAGATGGA GGACAAAGCC
TTTGCGCAAT TGATCGGCGA CGAACGGCTC GCTAACTACC GTCACTACAT GGAAAGCCTG
CGTAAATTCC ACCCCCACAC CCTGACTGAG CGGGAAGAAA GCCTGTTAAA ACAGAAGAGT
CTGACCGGTA CAGAGGCGTT CTCCCGCCTG TTCGACGAGG TATCAGCATC ATTCCGCTAC
ACCATGACTC TCGATGGGGA AGAACGGGAG TTTACCGGCG AGGAGCTGTT GGGACTGCTC
CATCATACCG ACGCCATGGT CAGGGAACAG GCATTCGCTA CTTTCCTCAA GCGCCACGAG
GAACAGGGGA TCATCTTTTC TTCCGTTTTC AATACCGTTG CCCTCGACCA TGGGCAGGAC
CTGGAACTGC GCAACTACAA AAGCCCCATG GAGCCGACCA ACCTGGGTAA CGAGATCCCT
GCCGAGGTAG TAGAGCGGAT GATGTCCGTT TCCGAGGCCA ATTACCCGCT GGCCCAGGAG
TACTTCCGCC TCAAGGCGAA ACTGCTGAAT CTGGATAAGC TGAAAAACAC CGACGTCTAC
GCGCCGGTTG GGGAAATAGA GCAACACTAT ACCTTTGCCG AGGCCCGCGA CCTGGTGATT
GCCGCCTATG ACCGGTTCTC ACCGGAATTT CGGGATATAG CCGCCGCCTT TTTCAAGGAC
GGCAGGATTG ACGCCCTTCC CCGCATCGGC AAGAGCGGCG GCGCCTTCTG CATGGGAATG
ACCCCGCGAC TCGCGCCATA CGTGCTTCTC AACTTTACCG GCAACCTGCG CGACGTGGCC
ACCGTAGCGC ACGAACTGGG GCACGGCATC CACTTCACCC TCGCCCAACG CCAGACCATG
GTCAACTACC ATGCACCGCT CCCCCTGGCG GAAACGGCAT CGGTCTTCGG CGAAATGCTC
CTCACCCGAC ACATGCTGGA GGGTGAAACG GACAAGCAGG TGAAGATCGC CCTTCTTTGC
GCCAAGATCG AGGACATCAT CGCCACCACC TTTCGTCAGA ACGTCCTGAC CCGTTTTGAA
GAGCGGATGC ACCTGGAGCG GAAGAAGGGG CTACTGACCG CGACGCAGCT CTGCGACCTG
TGGTGGGAAG AAAACGCCAG GCTTTACGGC GATTCAGTGG AGATGATCGA AGCATACCGC
TGGGGATGGA GTTACATCTC TCATTTCATT CACACCCGGT TCTACTGCTA TTCTTACACC
TTTGCCGAAC TCCTCGTCCT CTCCCTCTAC CAGAGATACC TCAAGGAAGG AGACGCATTC
ATCCCCACCT ACCGGGAGAT CCTTGCCGGA GGCGGCTCCA AGTCACCGGC CGACACGGTC
AGACCGGCCG GCATCGACCT TGCCGACCCG GACTTCTGGC AGAATGGCTA TGACGTCCTG
ACCGGCCTGC TTGAAGAACT GAAACAGCTG GTCTGA
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| Protein sequence | MGYDIKDLLW NTAPLYTGPE SPDLEGDFEA AATGANGFRE RYRGRVAGLD VVELQKALVE
YEELEELIVK PQLYAHLLFA ADSENDVNKR LSQKAAEFGN LMSRELLFFD LEIIQMEDKA
FAQLIGDERL ANYRHYMESL RKFHPHTLTE REESLLKQKS LTGTEAFSRL FDEVSASFRY
TMTLDGEERE FTGEELLGLL HHTDAMVREQ AFATFLKRHE EQGIIFSSVF NTVALDHGQD
LELRNYKSPM EPTNLGNEIP AEVVERMMSV SEANYPLAQE YFRLKAKLLN LDKLKNTDVY
APVGEIEQHY TFAEARDLVI AAYDRFSPEF RDIAAAFFKD GRIDALPRIG KSGGAFCMGM
TPRLAPYVLL NFTGNLRDVA TVAHELGHGI HFTLAQRQTM VNYHAPLPLA ETASVFGEML
LTRHMLEGET DKQVKIALLC AKIEDIIATT FRQNVLTRFE ERMHLERKKG LLTATQLCDL
WWEENARLYG DSVEMIEAYR WGWSYISHFI HTRFYCYSYT FAELLVLSLY QRYLKEGDAF
IPTYREILAG GGSKSPADTV RPAGIDLADP DFWQNGYDVL TGLLEELKQL V
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